Brassica oleracea (wild cabbage): 106320580
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Entry
106320580 CDS
T04124
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106320580
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
boe00535
]
106320580
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106320580
Meiosis-specific proteins
Cohesin complex and associated proteins
106320580
Proteoglycans [BR:
boe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106320580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106320580
NCBI-ProteinID:
XP_013614416
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MYIKLVIIEGFKSYNEQTATEDFSSKVNCVVGANGSGKSNFFHAIRFVLSDIFQNLRNED
RNALLHEGVGHQVGSAFVEIVFDNSDNRIPVDKDEIRLRRAIGLKKDEYFLDGKHITKNE
VMDLLESAGFSRSNPYYVVQQGKIASLTMMKDSERLDLLKEIGGTRVYEEKRCESLKIMQ
DTGIKRNHIIQAVQYLDEKLRELDEEKEELRKYQQLDKQRKSLEYTIYEKQLHDTREKLE
QTEAERTKASEESTKMYDRVEKAQDECRSLDESLAGLTKELQTMNNKKETVEALKTEAIK
KKTKLELDENDLKERIAGNIQSKNDALEQLSMVEREREDSLKELEAITPLYESQVDKEKQ
TTKRIMELEKKLNILYQKKGRATQFSDKATRDEWLRKETKYLKRVLDSNMGQEQKLQDEI
FGLNTDLKERDAHIKNHEVEISELDTHISKSHEQFNIKKRERDEEHRKRREKWGEESQLS
SEIDKLKMELERAKKNLDHATPGDVRRGLISIKRICSEHKINGVFGPLVELVDCDEKFFT
AVEVTAGNSLFHVVVEDDDISTKIIEHLNSRKGGRVTFIPLNRVNAPHVNYPQCSDAIPL
LRRLKFDSKFAPAFGQVFGRTVVCQDLNVATRVAKSDGLDCITLEGDQVSRKGGMTGGFY
DHRRSKLRLMNTIIQNMKSIDTKEKVLEDVRRQLQVIYQQITQIVTEKQRLESDWTHSRL
QVEQLKQEIANETKQKHAIHIALEHKEKSLGDVRIQMEQLRSSMAMKEAEMATELVDHLT
PEETEELSRLNPEIEDLKDKLIAFKTDRIETETRKAELETNLSTNLKRRIDELHATIASV
EDYSLPSSAGLETQELDDAKLLVEEFTNELQGLCRSIDEKTKQVKKIKDKKAKLKTLQDD
CEMKVQDANKKLEELFSLRNTLLSKQEEYRKKIMGLGPFSSESFDMYKQKNIKELQKVLH
GCSEQLQQFSHVNKKALDQYVNFTEQREELQKRKTELDAGDEKIKELITVLDQQKDESIE
RTYKMVSFHFREIFSQLVQGGHGHLVMMKKTTKKDRDHDDEDGCGEAATERRVEKYDGVT
VKVSFTDQGETRSMKQLSGGQKTVVALALIFAIQKCDPAPFYLFDEIDAALDTQYRTAVG
NMIRGLADDSVSTQFITTTFRPELVKVADKMYGVFHENNASIVKVISKEQALNFIQNDQS
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagctggttataatcgaaggtttcaagagttacaatgagcaaactgctact
gaggatttcagcagcaaagttaactgtgttgttggggcaaatgggtctgggaaaagcaac
tttttccatgcaattcgttttgtattgagtgacatcttccaaaatctgcgtaatgaagat
aggaatgcgttactccatgaaggagttggtcatcaagttggatctgcgttcgtggagatt
gtctttgataattctgacaaccgcatccctgttgataaagatgaaattcgcttgcgccga
gctattggtctgaagaaggatgaatatttcttggacgggaaacacattacaaaaaatgaa
gttatggatttactggagagtgctggattttctcgttctaatccttactatgttgttcaa
caaggaaagatagcctcgttgacaatgatgaaagattcagaacggctagatctgctaaaa
gagattggtggtacccgtgtttatgaggagaaacgctgtgagagtttgaaaattatgcag
gatacagggattaaacgaaatcatatcatccaagctgtccaatacttggatgaaaaacta
agggaactggacgaagagaaagaagaactcagaaaataccaacaacttgataagcagaga
aaatcactcgaatacaccatttatgaaaaacagcttcacgatactagggagaaactggaa
cagactgaagctgaaagaactaaagcatccgaagagtctacaaaaatgtatgacagagtt
gagaaggcccaggacgagtgcaggagcttagatgagtcgctggcaggactgacaaaggag
cttcagacaatgaacaataagaaagaaactgttgaagcactaaaaactgaagctataaag
aagaagacaaaacttgagcttgatgagaatgatttaaaggaacggattgctggaaatatc
cagtcaaagaatgatgcacttgagcaacttagtatggtggaaagagaaagggaggattct
ttgaaggaactagaggcgattactcctttgtatgaaagtcaagttgacaaggagaagcag
acgaccaaaagaatcatggagctggagaagaagcttaatattctttatcagaaaaaggga
cgtgcaactcagttctcagataaggctactcgagacgaatggctccggaaagaaactaaa
tatctcaagcgtgttctagactcaaacatgggtcaagagcaaaaacttcaggatgaaatt
tttggcctcaatactgatttgaaggagcgtgatgcacacatcaagaaccatgaagttgaa
attagtgaactggacactcacatttccaagtcccatgaacaattcaatattaaaaagagg
gagagggatgaagaacatagaaaaagaagggaaaaatggggagaagaaagtcaactatct
tctgaaattgacaagttgaaaatggaacttgagagggcaaagaaaaatcttgatcatgca
actccaggagacgtaaggcgaggactgatctctatcaaacggatttgctctgagcataag
atcaatggagtttttggtccacttgttgagctggttgattgcgatgagaagtttttcacc
gcagttgaagtcactgctggaaacagcctatttcacgtagtagttgaggatgacgacatt
tcaaccaagataattgaacacctgaattctcgaaagggtggacgtgtgaccttcataccg
ctgaatcgagtaaatgcacctcatgtaaactatccacaatgttctgatgcaataccactg
ctgaggagattgaagttcgactccaaatttgcaccagcatttggccaggtttttggtaga
acagttgtatgtcaagatctgaatgtagcaacaagagttgctaagagtgatggcttggat
tgcataactttagaaggtgaccaggtgagcagaaagggtggcatgactggtggattttat
gaccacaggcggtcgaaattgagattaatgaataccataatacaaaatatgaagtctata
gatacgaaggagaaggtgttggaggatgttagaagacagctacaagtgatatatcagcag
atcacacagattgttactgagaagcagagacttgaatcagactggacgcatagcagatta
caggtggagcaactgaagcaagagatagctaacgagactaagcagaaacatgctatacat
atagcccttgaacataaggagaaatcactaggtgatgttagaatacaaatggagcagtta
agatctagcatggccatgaaggaagctgaaatggccacggaacttgtggatcacctaacc
ccagaagaaacggaagaattatcacgattaaacccagaaattgaggatcttaaggacaaa
cttattgcattcaagacagatcggattgagacagagacaagaaaagcagagttggagact
aatttgtctaccaacttaaagaggagaatagatgagttacatgctactatagcttccgtc
gaggattatagtttgcctagttcagctggcttagaaacacaagaacttgatgatgcaaaa
ctattggttgaagagttcacaaacgagctccaaggtctctgtcgaagcattgatgagaag
actaagcaggtcaagaaaattaaagataagaaggcgaagttaaagacattgcaagatgac
tgtgagatgaaagtgcaagatgcaaataaaaagttggaggaactattcagccttcgtaac
acactcctttctaagcaagaagagtataggaagaagattatgggattgggtccattttca
tccgaatcttttgacatgtataaacaaaaaaatataaaggagctgcagaaggtgctacac
gggtgcagtgaacagctgcaacagttcagccatgttaacaagaaagcgcttgatcaatat
gtaaatttcacagaacagcgagaagaacttcagaaacggaaaactgagcttgatgcagga
gatgagaaaataaaagaattgattacagttctggatcagcagaaagacgaatctatagaa
cgtacttacaaaatggtttcatttcacttccgggaaatattctctcagcttgtgcaaggt
ggacatggtcaccttgtcatgatgaagaagactacgaaaaaggaccgtgatcacgatgac
gaagatgggtgtggtgaagctgctacagagagaagggttgagaaatacgatggtgtaaca
gtgaaggtgtcgtttactgatcaaggggagacacggtcaatgaaacagttgtcgggagga
caaaagaccgttgttgctcttgcattaatatttgccatccagaaatgcgatcctgcaccg
ttctatctctttgatgagattgatgcggcacttgatactcagtatcgaactgctgtcggc
aacatgattcgtggtttagctgatgacagcgtaagcacgcagttcataaccacaactttt
cgtccggagctagtgaaagttgcggataagatgtatggagtgtttcatgagaataatgcg
agtattgtgaaagttatttcaaaggaacaggcgttgaacttcatccagaatgatcagtcg
ccatga
DBGET
integrated database retrieval system
