Brassica oleracea (wild cabbage): 106320805
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Entry
106320805 CDS
T04124
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106320805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106320805
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106320805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
106320805
NCBI-ProteinID:
XP_013614612
UniProt:
A0A0D2ZTF9
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MVMVVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLLRILSLVDDRNVIAASGVCCG
WRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCH
ELQELDLSKSLKLTDRSLDALAHGCPNLTKLNLSACTSFSDKAIAYLTTFCRNLKVLNLC
GCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITD
ESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSSAKKSKFDEEGLR
SLNISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRSVPHS
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtagtaggagaaacatccatggagcttgaccagtgttttcagatgatgatg
atgaagatggaaggagtctcgatcaaagagtggaaagatatccctgttgagcttctcttg
agaatcctctctcttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggc
tggagagatgccatctcgcttggcctcactcgtctccggctctcttggtgcaacaacaac
atgaacagcttagttctgtctcttgctcccaagtttgtaaagctgcaaactttgatactg
cgccaagacaaacctcagctagaggacaatgcggtggaggccatagcaaatcactgccat
gagctgcaagagcttgatctcagcaaaagcctgaaactcactgaccgttccctcgacgca
cttgctcatggctgccctaacctcacaaaactcaaccttagcgcttgcacttcgttcagc
gacaaagctattgcgtatctgaccacgttctgcagaaacctgaaggttctgaatctttgt
ggatgtgttaacgctgtttctgactataccttggaggctattgggaacaactgcaatcag
atgcagtcactaaacttgggatggtgtgagaagatcagtgatgatggggttatgagttta
gcttatggctgtccagatctcaggaccttggacttgtgtggttgtgttctcattacagat
gagagtgtggtagctttagctgattggtgcgtccacttgagatcactggggctatactac
tgcagaaacataacggacagagccatgtactcgctagctcaaagcggggtgaagaacaaa
ccaggggggcaatggaaatcatcggccaagaagagcaaattcgacgaagaagggctgaga
agtctcaacataagccaatgcactgcactcacaccttcggctgttcaagcggtttgcgat
acgtttcctgctcttcacacgtgttcggggagacattcgcttgtgatgagcgggtgtttg
aacttgacgtctgtgcactgtgcttgtatccttcaggctcatcgctcggttcctcactct
gctcactga
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integrated database retrieval system