Brassica oleracea (wild cabbage): 106321020
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Entry
106321020 CDS
T04124
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106321020
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106321020
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
106321020
NCBI-ProteinID:
XP_013614798
UniProt:
A0A0D2ZU26
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MTKSNITLPLLFTLLTFIDVSTGAANVFNVVSFGAKPDGVKDSTGAFLKAWEAACGSAAA
ATVMVPSGTFMVKGITFGGPCKSRLKFQVAGTVVAPPDYRAFGNSGYWILFNKVSKISLI
GGTFDARANGFWACRKSGQSCPPGVRSITFNSGKDVIISGVKSMNSQITHMTLNGCTNVA
VRYVKLVAPGNSPNTDGFHVQLSTGVTFTGSTVQTGDDCVAIGAGTRNFLISKLACGPGH
GVSIGSLAKELNEDGVENVTLSSSVFTGTQNGVRIKSWARPSNGFVKNVFFQDLIMKNVQ
NPIIIDQNYCPSHQGCPTEHSGVKISQVTYKNIQGTSATQQAMKLVCSQSNPCTGITLQD
IKLTYKKGAPATSYCFNAIGTSLGVTQPTSCLNR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcaaatattacattaccacttctcttcacactcctcaccttcatcgatgtc
tcgaccggcgccgccaacgtattcaacgtcgttagcttcggggccaaaccggacggtgtg
aaggattcaacgggagcattcctcaaagcatgggaagcagcttgtggctcggcagctgca
gccactgtgatggttccaagtgggacatttatggtgaagggaataacgtttggagggcca
tgcaagagcagactcaagtttcaagtggctggaaccgtcgttgctccgcctgattacagg
gcatttggaaactccggctactggattcttttcaacaaggttagcaaaatctcacttatc
ggcgggacttttgatgctcgagctaacggattctgggcttgccgaaaatctggtcagagt
tgtcctcccggtgttaggtctataacgtttaactcgggcaaagacgtgatcataagtgga
gtcaaatcgatgaacagccagatcactcatatgactctcaacggttgcaccaatgtcgcc
gtccgttacgtgaagctagtggctcccggaaatagcccaaacaccgacggtttccacgtt
cagttatccaccggagtcacatttaccggaagcaccgttcagaccggagatgattgtgtt
gctattggtgctggtacccgcaatttcctcatctccaaacttgcttgtggcccaggtcat
ggtgttagtatcgggagcttggcaaaggaattgaacgaagatggagtagagaatgtgaca
ctatcaagttcggtatttacggggacacaaaacggcgtaaggataaagtcgtgggcgagg
ccaagtaacgggttcgttaagaacgtcttcttccaagacctgatcatgaagaacgtccaa
aacccaatcataatcgaccaaaactattgtccttcccaccaaggttgccctaccgagcat
tcgggggtgaaaataagccaagtaacgtataagaacatacaaggaacttccgcgacacaa
caagcaatgaagctggtatgcagccagagcaacccatgtacaggaatcacattacaagac
attaagcttacttacaagaaaggagctcctgctacttcatactgtttcaatgctattggg
actagtctcggtgttactcaacctactagttgtttaaaccgataa
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