Brassica oleracea (wild cabbage): 106321799
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Entry
106321799 CDS
T04124
Name
(RefSeq) zinc finger CCCH domain-containing protein 24-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106321799
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106321799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
Cons_hypoth95
MTS
Methyltransf_4
NYN
N6_N4_Mtase
Ubie_methyltran
Methyltransf_11
PCMT
PrmA
Motif
Other DBs
NCBI-GeneID:
106321799
NCBI-ProteinID:
XP_013615491
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MKCLEDEGWNVPVEQMTIVVGYKCTHVPQELQDNKNVIVHRAHDFDRPHKKIEPTKGNQA
ADDEMHTLIGNLRETATEPHNILILTGDGDFNEDIQNLEGDGHNVMVVHSRESISERFRE
DRQIRTFLGLEREADKTAKQRRREWLNEKKAARKYKSAREALSPLADLSYADQLEQKKAS
IMQKLEKLTGNERKACPNGKSLPELVLQSREIGGLSCKLEGIIESPLTNGYRNKCEFSTG
YSGEWKLTVGVVLGTDSAGVTVVEEAVNCPSISKLACQYASIFRSFLEKSRLPVWNMSKS
CGFWRQLTVREGSKPGVFSNDEDADSRIAEVMLMVQVCTRDTDEAVVATEFEELAKAFAE
GARASSPPLPLTVLVVQDHVGISNFAQPDCPLRLLPIQMSDNGTHHDQPTNVLTEALIHD
HINNLRFSISPTAFFRFNTGAAEKLYSLAGDWADLCPDTLLFDVYCGTGTIGLTLAHRVR
MVIGIEMNASAVSDAERNAEINGISNCKFICSKAEYVMSSLLKDEISNAIAIVDPGYPGL
HPDVIEALRTHPGLKTLVYISLSPEKLVANAIELCRPSFEKTGQENKAKKMPASEPFKPV
KAMAVDLSPHTHYCEMVMLFKR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttggaagatgaagggtggaatgtaccggttgaacaaatgacgattgttgtt
gggtacaagtgtacacatgtaccacaagagttacaggacaacaagaatgtcattgtccac
agagcccatgactttgatagaccacacaaaaaaattgagccgacaaaaggaaaccaagcc
gccgatgatgaaatgcacactctgataggaaatttgcgggagacggccacagagcctcat
aacattttgatcttgacgggcgatggggatttcaacgaagatatccaaaacctggaagga
gacggccataatgtaatggttgtccattccagagagtcaatttcagaacgctttagagaa
gatcggcaaataagaacctttttaggtcttgaaagagaagcagataagacagcaaaacag
agaagacgtgagtggctcaatgaaaaaaaggcggctcgtaaatacaaaagtgcccgcgaa
gctttgagtcccttggcagacctgtcttacgccgaccagcttgaacagaagaaggcttct
atcatgcaaaagttggaaaaactgactggaaatgagcgtaaagcttgtccaaatggaaaa
tcacttccagaattggtccttcagtctagagaaataggtggcctttcatgtaagctcgaa
ggaattatagaatcaccgcttacgaatggttacaggaacaagtgcgagttctcaactgga
tattccggtgagtggaagttaactgttggagtcgtgctcggaactgatagtgcgggtgtg
acagtagtggaggaagctgttaactgtcccagtatctctaaacttgcttgccaatacgct
tccatctttcggagtttcttagaaaaatcaaggctccctgtttggaatatgtctaaaagc
tgtgggttctggcgacagttgacggttcgagaaggaagcaaacccggcgtgttctcaaat
gatgaagatgccgattcaagaattgcagaggttatgcttatggttcaggtttgtactagg
gatactgatgaggctgtagtggcgactgagtttgaagaactggcaaaagcatttgctgaa
ggagctagagcaagctctccacctcttcctctgactgtattagttgttcaagatcacgta
gggatatcaaattttgcacaaccagattgtccactacggttgctgcctattcaaatgtca
gataatggaacacatcatgaccaacccaccaatgtcttgactgaagctttgattcatgat
catatcaacaaccttcggttcagcatatccccaacagcattctttcggtttaataccggc
gccgcagagaagttgtattcacttgctggagattgggctgatctttgtcctgacacttta
ctctttgatgtatattgtggaactggaacaattggtcttacactggcacatcgtgtccgt
atggtgattggcatagaaatgaatgcttcggctgtatcagatgcggaacggaatgcagag
atcaatggcattagcaattgcaagttcatatgttcaaaggcagagtacgtgatgagctct
ttacttaaagatgaaatctcaaatgcaattgctatagtggatccaggttatcccggactt
catccagatgtgatcgaagcattgagaacccatccagggttgaagacccttgtgtacatt
tcgctcagccctgaaaagctggtggcaaacgcgatagagctttgcaggccgtctttcgag
aaaacgggtcaagagaacaaagccaagaagatgcctgcttctgagccttttaagcctgtc
aaagccatggccgttgacctttcccctcacacccactactgcgagatggtaatgctattc
aaaaggtaa
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