Brassica oleracea (wild cabbage): 106321863
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Entry
106321863 CDS
T04124
Name
(RefSeq) Fanconi anemia group I protein homolog
KO
K10895
fanconi anemia group I protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
106321863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106321863
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
106321863
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
106321863
NCBI-ProteinID:
XP_013615548
UniProt:
A0A0D3AX08
LinkDB
All DBs
Position
C2:47561704..47567826
Genome browser
AA seq
1427 aa
AA seq
DB search
MTVAAEEPSHHAQKPLTDNDIIRLAQYHHCQTSLSLPPYLLSPTSHDPLLAYLKSRSSLP
SPSKPVSEYAIALLSLISLSPTTPSLSSLLASLLISYTQIFSEIPSDSDSLKTIQLFGTL
LRYLHVKEIKSVVDSILSGVSRVISVDDAQLFDLLPVCFDLLRREAKASEIDYVNSAIDR
VLTCEWEKGFLTKMVSLAKELTFLDKGRKSELLEKVFLGVKCIDLQDLPSLVYQLLVLAS
KGFCKREVIGGVVCFFGSKTESRVASVLRQIEGTVLLHVNFAVKQDPSLGQEVVALVKSD
LRAFNHFTVAVLFSVARVRKFGENSLGVLRTALLSAYNDYRLSKDCKWLPDELKEESLLH
AKLVEKSLLRAVSECKYGREHVFPSVIQFGFMLLESVEEGRSNESGGSSGVLGTEKLSIQ
ILGTLFEVHDMTRNEIIEQCKFRILSLKCAKSKPILRLLGFLVQRYSLIMLEYVHHLKEL
LDYFTLMEGNISCFLVSAVIPLIKFSRDLQDYTILVIRKAMFRREDTVRVSATKVIIELI
LAEKQAKEDSSFTLQDSSSQASSSQHTEVSCTVRGNLFTELNGLLQRCLYQQAKVKEVVY
DGLVKLVLIDPSSGAHVLDFLMPHFLRFFRQDTDFQLGITSCIKVEGGKFIIEEPLDRLL
FCISWILLLQPHNNSDRPSDATWPCFGFALTQENEQAGRNVSHEVYSSTLLKVRNFLLGK
KLGDIVGLSQDTVSASLEEDKRKSYCLIILGIVQVLQNYIITDLEKQPEGKKGEIEKDIV
DLVDLYESLEKEAGKSKQSNIGKRVRFSSRSKSDDTDVGFASINEEREQVPFLSTSSIYQ
LFLIAFKLHSSKSACNLSGSQDHSQSSSAKTEKSISGVLSFTLHVCVGHIRSSLCMKEEN
PLKPLVYGDMIVLGPPLMRVVYLLKPGPLVVTGQMNKGRKDAEGRKQCLHLALLSLKELL
SIYSNGSGLTGLLEDLLAVPASDDAILEECSEASKIEDPLVKNIEIFMEKVMKPMITDLI
AQNSNDIEILCDIVLMLGSTLPDKFKQRHGSWAHEIFRSCETSNTTVAKSVLKLAISFTT
SPGDLSIAVEVAKELQNVIGLDKSDTSQVSESYMIVNQSTSASITSCILQLVDSAIGDMD
WGTKKLKNLYVASQKNIHLNHDDESTLGLALEEALYAMAESTVRILSSFVLMNLKDSQAA
QFLRLAVKFYKQLAQIVKQRIAPKGCKQTLPSLKFQKLVELTCKSLTVPLYPFLAEMQKE
QQESVSSNSKGIINKIKQENKCIPDLVFQIEDYERYLIQLSKVTKLNLLRHAKRSTARDF
KIIEDAEAPAGGEDGGNQEETETQNNNVGGNEDGLGEESEDDPEQASRDLDSDKAIAAEE
NDEDQEEEKEGEEDDEAEEEGSGLSRPKKIAKKSLVVEDSDEDSVTF
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgccgccgaagaaccgtcgcaccatgctcagaagcctctcaccgataacgac
atcatccgcttagcccagtaccaccactgccaaaccagcctctccctccctccctacctc
ctctctccgacctcccacgatcctctcctcgcctacctcaaatcccgctcctctctacct
tccccgtcgaagcccgtttcagagtacgcgatcgctctcctatcgctaatctctctatcc
ccgactactccgtctctctcctccctcctcgcatctcttctcatctcctacactcagatc
ttctccgaaatcccgagcgattcggattccctcaagacgattcagctcttcgggactctc
ttacggtacctacacgtcaaggagatcaaatccgtcgtcgattcgatcttatccggtgtg
tctagagttatctctgttgatgacgcccagctgtttgatctattgcctgtgtgctttgat
ttgttgcgtagagaagctaaggctagcgagatagattacgttaattcggctatagatcgt
gttctcacctgtgaatgggagaaagggtttctgacgaaaatggtatctcttgctaaggag
ttaacttttcttgataaggggagaaagagtgagttgctggagaaagtgtttttgggtgtc
aagtgtatagacttgcaggacttgccttcacttgtgtatcagttacttgttcttgcttcc
aaaggtttttgcaagagggaggtgattggaggagttgtttgcttttttgggtccaaaact
gagagtagagtagcgtctgttcttaggcagatcgaggggactgttcttctccatgtgaat
ttcgcagtgaagcaggatccttcgctggggcaggaggttgtggcgttggttaagtctgat
ctcagggcttttaatcattttactgtcgcggttctgttttcggttgctagggtcagaaag
ttcggtgagaattctttgggggtattgagaacggctttgcttagtgcgtacaacgattac
agactctccaaagattgcaagtggctacctgatgagctgaaggaagagagtttactgcat
gccaaattggttgaaaaatctttgctaagagcggttagtgagtgcaaatatgggagggaa
catgtgtttccgagtgttattcaatttggctttatgttgctagaatctgttgaagaaggt
agatccaacgagtctggtggttccagtggcgtactgggtactgaaaagcttagtattcag
attctgggaaccctatttgaagtccatgatatgacaagaaacgagataattgagcaatgc
aagtttcgcattctttctttgaaatgcgcaaagagcaagccgatattaaggttgttgggg
tttcttgtccagagatactcacttatcatgttggaatatgtccatcatctcaaagaattg
ttggattatttcactctcatggagggaaatattagctgttttctggtttctgctgttatc
ccgctcatcaaattcagccgtgatctgcaggattataccatcctggtgattcggaaggct
atgtttagacgtgaagatacagttcgtgtatcagcgacgaaggtaataattgaacttata
cttgcagagaaacaagctaaggaagacagctcatttactctccaagactcatcaagccaa
gccagttctagtcagcacactgaagtgagctgcactgtgaggggaaacctctttactgaa
ctgaatgggttgcttcaaagatgtctttaccaacaggcaaaggtgaaagaagtagtttat
gatgggctggtgaagttagtcctgattgatccatcaagtggagcacatgtattggacttt
cttatgcctcactttcttcgtttcttcagacaggacacagattttcagcttggaatcact
tcatgcattaaagtagaaggtggaaaatttattattgaagagcccttggataggcttctc
ttttgtatctcttggattttactccttcaaccgcacaacaactctgatcggccttctgat
gccacctggccatgttttggtttcgcacttactcaagaaaatgagcaggcaggaagaaat
gtatctcatgaagtgtactccagtactttgttgaaggtccgaaactttctactaggcaaa
aaattaggagatattgttgggctgtctcaggatacagtttccgcatctctagaagaagat
aaaagaaaatcctattgtctgattatattgggcatcgttcaagtgctgcaaaattatatc
ataacggatctagagaaacagccagaaggaaagaaaggtgaaattgaaaaggatattgtt
gatttggttgatctttatgaatcactggaaaaggaggcggggaaatcaaaacagagcaat
atcggcaagagagtacgattcagctctcgtagtaaatctgatgatactgatgtgggattc
gcaagtatcaacgaagagcgagaacaagttccctttttgtctacttcaagtatctaccag
ctatttctaatcgccttcaaactccatagcagcaaatcagcatgtaatctttcaggttcg
caggatcacagccagtcatcatcagccaagacagagaagtcaatatctggagttttgtct
ttcactttgcatgtttgtgttggacacataagatcatctctttgcatgaaggaggaaaat
ccacttaaaccgttggtctatggtgacatgatagttctgggccctccactgatgagagta
gtttacctgctaaagccaggaccacttgtagtaaccggacagatgaataaaggaaggaaa
gatgctgaaggaagaaaacagtgtctacatctggccttgcttagcttgaaagagctgctc
agtatatattcaaatggatctggcttgactgggttgcttgaggatttgttggcagtgcct
gcatccgatgatgctattttagaagagtgcagcgaagcttcaaaaattgaagatccactt
gtaaagaacatcgaaattttcatggaaaaagtcatgaagcccatgatcacagaccttatc
gcccaaaactctaacgatatagagattctttgcgacatagtgttgatgcttgggagcact
ctacctgacaaattcaaacaacggcatggatcatgggctcatgaaatcttcagaagctgt
gaaacatctaacaccactgttgcaaagagcgttttaaagcttgccatctcttttaccaca
tctcctggtgatctctccatagccgtggaagtggctaaggagttgcaaaatgtcatcggt
ttagacaaatctgatacatcacaagtctccgaatcatacatgatcgtaaaccagtcgaca
agtgcttcaataacttcttgcatactgcaattagttgattcagcgataggtgacatggat
tggggcacaaagaagctaaagaatttgtatgtggcctctcagaagaacatccatctcaac
catgatgatgagagtacacttggactggctctcgaagaagccctttacgcaatggctgag
tcaacagtcaggatactctcttcctttgttttgatgaacctcaaagactcgcaagcagca
cagtttctcagattggctgttaagttttacaaacaattagcacagattgtgaaacagagg
attgctcccaagggttgcaagcaaactcttcccagccttaagtttcaaaaactcgttgaa
ctaacttgcaagagcctcacagttcctttatacccctttttagctgaaatgcaaaaggaa
caacaggaaagtgtgagttccaattccaagggtataatcaacaagatcaaacaggagaac
aaatgcatccctgatttggtattccagatagaagactatgaaagatacttaatacagctg
agcaaagttactaaattgaatttgctgaggcatgccaagcgcagcactgctagagacttc
aagataattgaagatgcagaagctcctgctggtggtgaagatggaggaaaccaagaagaa
acagagacacagaacaacaacgttggtggtaatgaggatggtttgggagaagagtcggaa
gatgatccggaacaagcatcacgggacttagattctgataaagccatagcagcagaagag
aatgatgaagaccaagaagaagaaaaagaaggagaagaagatgatgaagctgaagaagaa
ggaagtggcttaagtcgtcctaaaaagatagcaaagaagagtttggtcgtggaagattct
gatgaagattctgtaacattttag
DBGET
integrated database retrieval system
