Brassica oleracea (wild cabbage): 106322597
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Entry
106322597 CDS
T04124
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106322597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106322597
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106322597
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
106322597
NCBI-ProteinID:
XP_013616119
UniProt:
A0A0D3ASC9
LinkDB
All DBs
Position
C2:28928132..28931103
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AA seq
305 aa
AA seq
DB search
MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIGLKIPPRPPGYAFVEFEDPRDADD
AIHGRDGYDFDGHCLRVELAHGGRRSSNDARSSYGRDGGDRGRGPSRRSEFRVLVSGLPS
SASWQDLKDHMRKGGEVCFSQVYRDGRGTTGIVDYTSYEDMKYAIKKLDDTEFRNAFSRG
YVRVREYDSRRDSKSPSRGRSYSKSRSRSRSRGRSHSRSRSRSRSRSRSRSPKAKSSRRS
PAKSTSRSPRSRSKSRSPPPRGSRSRSTSPLPFVQKEASKSPSKLSPAKSPMRSRSKSRS
RSPAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcaagtagaactatatacgtggggaaccttccaggcgatatccgggag
agagaggttgaagatttgttcagtaagtatggacctgttgttcaaatcggtctgaagatc
ccaccaaggcctcctggctatgccttcgtcgagtttgaggatcctcgggatgctgatgat
gcaattcatggtcgtgatggatatgactttgacggccattgtttacgggtggagctagca
catggtgggaggcgttcatctaatgatgctcgtagtagttacggtcgtgatggtggagac
cgtgggcgtggaccatctaggagatctgagttccgtgttcttgtgtcaggtttgccttca
tctgcttcctggcaagacctcaaggatcacatgcgtaaaggaggagaagtctgtttctct
caagtctaccgtgatggtagaggtacaactggaattgtagattacaccagctacgaggac
atgaagtatgcgattaaaaagctcgatgacacagagtttaggaatgcgttttctcgtgga
tatgtccgggttcgagaatatgattcaaggagggattcgaaaagccccagccgtggaaga
tcttattctaaaagccgtagccgtagtcgcagccgtgggcggagccacagtcgtagccgc
agcagaagcaggagcaggagcaggagcaggagcccaaaggctaaatcttcccgtagatcg
cctgcaaaatctacgtctagatcccctcgttcccgctcaaagtcaaggtcaccacctccg
cgaggatctcgttcaaggtcaacatctcctctgccttttgttcagaaggaagcaagtaag
agccctagcaagctgagtccagccaagagccctatgcgtagcaggagcaagagcagaagc
aggagtccagctcggtaa
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integrated database retrieval system
