Brassica oleracea (wild cabbage): 106322709
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Entry
106322709 CDS
T04124
Name
(RefSeq) transcription factor GAMYB-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106322709
Transcription factors [BR:
boe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
106322709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
106322709
NCBI-ProteinID:
XP_013616281
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Position
C1:complement(40268126..40270782)
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AA seq
486 aa
AA seq
DB search
MSYTMVTDESDDAMYSSIYNESPSAADNIGSGCTSRGKGSVLKKGPWTSTEDGILIDYVK
RHGEGNWNTVQKHTSLARCGKSCRLRWANHLRPNLKKGAFSKEEEQLIVEMHARMGNKWA
QMAEHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPGTHVEDLHWSQEYHPSTSNVTGVDR
RRHQDILQLANSKANVLFDDLNFANVLFEDLNFATSLLPVASHISDMFSCNMLGTGASSS
SRYESYTPPILPSPKQLGGSGSLFNIRQEFQSPQKNPRSCSISDHPMYGNHHQSDVMIQD
SHHTFTDGMVPTSKPLFGAVKLELPSFQYSEASGFDQWKTTTPSPPQSDLLDSVDTYIQS
PPPLEIDEPDCFSSCDTGLLDMLLHEAKIKASAKHSFSSTACITDGTQDVPRGGETHNIT
SGAGGNSSAFAVVKTEELDQVWEPKRADVVRPDVLLASSWQDQQGRFGIVRDSSSLSDAL
ALLLGG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagttacacgatggtgacggatgagagtgatgatgctatgtactcaagcatctacaac
gagtcaccatctgctgctgataatattggcagtggctgtacaagcagagggaaaggaagt
gtcttgaagaaagggccgtggacctcaaccgaagacgggattttgattgattatgtcaag
aggcacggcgagggtaactggaacactgtgcagaaacacacgagccttgcacgttgtggt
aaaagctgtcgtctcaggtgggctaatcatctgaggccgaatttgaagaaaggagcgttt
agcaaagaagaagaacagctcatcgttgaaatgcacgctaggatggggaataaatgggca
cagatggctgaacatttgcctggtcgaacagataatgagataaagaattattggaacacg
cgtatcaagaggcggcaacgagcaggcttaccactttaccctcctggaacccatgttgaa
gacctgcactggagtcaagagtatcatccatcaacgagtaatgtcaccggagtagataga
agaagacatcaagacatcttgcagttggcaaactccaaagctaatgttctgtttgacgat
ctaaactttgctaacgtcctctttgaggatctaaattttgctactagcttgttacctgta
gcttctcacatatcagatatgttctcatgcaacatgctaggcactggtgcaagtagtagc
tctcggtacgaaagctacacgccaccaatcttgccttccccgaagcaactcggaggatct
ggatctctgtttaacataaggcaagagttccaatctccacaaaagaatccaagatcttgc
agtatctctgatcatcctatgtatggaaatcatcatcagtccgatgtgatgattcaagat
agccatcatacctttacggatggcatggttcctacttctaagcccttgtttggggcagtg
aagctggagctcccttcattccaatattcagaagctagtggatttgatcagtggaagacg
acgacaccgtcacctccacaatcagatctactggactctgttgatacttatattcagtct
ccaccaccgttggagatagatgagccagattgtttctcttcatgcgacaccggcctacta
gatatgctactccatgaagccaagatcaaagctagtgcgaagcacagtttcagttcaact
gcttgtataaccgatggtactcaggatgtaccacgtggaggtgaaacccataatatcaca
tcaggtgcaggtggaaattcatcagcttttgcagttgtgaagacggaagagttggatcag
gtatgggaaccaaagagagctgatgtagtacggcctgatgttttactggcgtcgagctgg
caagaccaacaaggccgttttgggattgttagagactcaagcagcttgagtgacgccctt
gcgcttcttcttggtgggtga
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