Brassica oleracea (wild cabbage): 106322728
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Entry
106322728 CDS
T04124
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106322728
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106322728
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106322728
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
106322728
NCBI-ProteinID:
XP_013616303
UniProt:
A0A0D3ALU8
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All DBs
Position
C2:10346454..10350177
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AA seq
651 aa
AA seq
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MVLTRSSKKAPKPQTPPVKNLSKAQTPPLSKAEKPQTLTSKKGAKSQKKPPLKKQKKDVI
VVEEEDDDEEVSDVESEEIDESDDGEKGSNGFFSDDDGEELLNDNFLDGSDDDEEEERSD
SDEALSSDSDSDEDDIQKESEAIDRAKAKEEEDADAELLDFNKEVGPEEHDTFRLPTQEE
LEEEARGPPDLPLLQSRIKEIVRALSNFNVLRPNGASRKECVEQLKSDLASYYGYNSFLI
GALFELFPPVELMEIIQAFEKQRPTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVG
LVVYDSQVPIGATPEYLAGYYMLQGASSFLPVMALAPKENERIVDVAAAPGGKTTYVAAL
MKNTGLIFANEMKVPRLKSLTANLHRMGVTNTIVCNYDGRELPKVLGERSVDRVLLDAPC
SGTGVISKDESVKTSKSLEDIKRFAHLQKQLLLAAIDLVDATSKTGGYIVYSTCSLMVAE
NEAVIDYALKMRNVQLVKTGLDFGQDGYRRFREHRFHPSLKQTKRFYPHVHNMDGFFVAK
LKKMSNMKQSSEDDDEAVETVEQTDVSSDDDEEAEAMEEMEKLSVPSKQPKENKERLAKS
KEKKKGKKDGKSKSKNVERKPKKKRSDWKKEIAQAREEKRRAMRENSKGKQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggttctcactcgcagcagcaagaaggcgccgaaacctcaaaccccgccggtgaagaac
ctctcgaaagctcagacgcctccgctatcgaaggcggagaaaccacagactctgacatcg
aagaagggagccaagtctcagaagaaacctccattgaagaagcagaagaaggatgttatt
gttgtggaggaggaagatgacgacgaagaggtttccgatgtagaatcagaagagatagat
gaatccgatgatggagagaaaggctctaacggctttttctctgacgacgacggtgaagag
ctcttaaatgataacttcctcgacggtagcgacgacgacgaagaggaggaacgttcggat
tctgatgaggctttgagctctgattccgactcggatgaagacgatattcagaaggaatct
gaagctattgacagagcgaaagcgaaggaggaggaagatgctgatgctgagcttctcgat
ttcaacaaggaagttggacctgaggagcatgatacctttcgcctaccaactcaagaggag
cttgaagaagaagctcgtgggccacctgatcttcctctgctgcagagtagaatcaaagag
attgttagagctctgtcgaattttaacgtcttgaggccaaatggagccagcaggaaagaa
tgcgttgaacagctcaaatctgatcttgcttcttattacggctataacagtttccttatt
ggagctttgtttgagctgtttcctcctgttgaacttatggaaatcattcaagcctttgaa
aagcaaaggcctacatctatccggacaaacacacttaagactcgaagacgggatcttgct
gatgtgcttctgaacagaggagtcaatctagacccattaagcaagtggtcaaaagtggga
cttgttgtttatgattcacaagtgcctatcggtgccactcctgaatatttggctggttac
tacatgcttcaaggtgctagttcgtttttgccagtgatggcccttgcccctaaagagaac
gagcggattgtggacgtagctgctgctcctggtggtaaaacaacttacgttgctgctcta
atgaaaaatactggtttgatatttgcgaacgagatgaaagtacctaggctcaagtcgcta
actgccaatctgcatcgcatgggggtcacaaataccatagtttgtaactatgatggaaga
gagctacccaaggtgttaggtgagagatcggttgacagagtattgttggatgcaccttgc
agtgggactggggtcatttcgaaagatgaatcagttaaaacttcgaaatctctagaggat
ataaagagatttgctcacttgcaaaagcaacttttactagctgctattgatttggtggat
gccacatccaaaactggtggatatattgtttactcaacatgttcacttatggttgctgag
aacgaagccgtaattgactatgccctgaaaatgaggaatgttcaacttgttaaaactgga
ctcgactttggccaagacggatatagaagatttagagagcaccggtttcatccatcttta
aagcagactaaacgtttttatcctcatgtacacaacatggacggattctttgtggcaaag
ctgaagaaaatgagcaacatgaaacaatcgtcagaggatgatgacgaggcggtagaaact
gtagaacaaactgatgtgtctagtgatgatgatgaagaagctgaggcgatggaagagatg
gagaagctttctgttcccagtaagcaacccaaggaaaacaaggagagacttgcaaaatca
aaggaaaagaagaaaggcaaaaaagatggaaagtcaaaatctaaaaatgttgagaggaag
ccaaagaagaagagatctgattggaagaaggaaattgctcaagctagggaagagaaacga
agagccatgagggagaactcgaaggggaagcaatga
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