Brassica oleracea (wild cabbage): 106322855
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Entry
106322855 CDS
T04124
Name
(RefSeq) protein argonaute 9-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106322855
03036 Chromosome and associated proteins [BR:
boe03036
]
106322855
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106322855
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106322855
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106322855
microRNA pathway
RISC loading complex
106322855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
THF_DHG_CYH
Motif
Other DBs
NCBI-GeneID:
106322855
NCBI-ProteinID:
XP_013616454
UniProt:
A0A0D3AKC2
LinkDB
All DBs
Position
C2:6084224..6089742
Genome browser
AA seq
906 aa
AA seq
DB search
MGSDEDKALPPPPPALPPNLVPEVEPIKKNTLLPMARRGTGSKGQRIPLLTNHFKVNFNN
ANGQFFHYSVAITYEDGRPVEAKGIGRKILDKVQQTYKTDLGSKYFAYDGEKTLFTVGPL
PSNKLDFSVVLEDAPSSRNNTGNGSPNESNDADRKRSKRPNQSKKFMVEISYAAKIPMHA
IAAALQGKETDSLQDAIRVLDVILRQSAARQGCLLVRQSFFHNDAQNFVPIGAGVVGVRG
FHSSFRTTQGGLSLNIDTSTTMVVQPGPVVDFLLANQNVKDPYSVDWNKARRALKNLRVK
VAPSNREYKISGLSENRCKEQMFSRNSKNDMGEVVEHQTTVFEYFTDFRNIQLQYSGDFP
CINVGKPKRPTYIPIEHCELVSLQRYTKSLTNLQRASLVEKSRQKPLERMTSLTTGLKNS
NYNADLVLQESGVSIGSSFTHVEGRILQAPKLRVGNGEDFQPRNGRWNFNNKKLVEPTTV
TRWAVVNFSARCDTNRLIPDLIRCGNMKGINVEPPYEVVFQESAQFRNAPPHIRVEKMFE
QIQSKLPGKPKFLLCILAERKNSHVYGPWKKKNLAELGIVTQCIAPTARINDQYLTNVLL
KINAKLGGLNSLLTMERSQAMPSVTQVPTIIVGMDVSHGSPGQSDVPSVAAVVSSRQWPL
ISKYRACVRTQSRKVEMIDNLFKLVPGQEEKMVDEGIFRELLVDFYSSSQKRKPDHIIIF
RDGVSESQFNQVLNIELDQMMQACKFLDEKWNPKFTVIIAQKNHHTKFFQDKGPDNVPPG
TIIDSKICHPRNNDFYLCAHAGMIGTTRPTHYHVLYDEINFTTDDLQELVHSLSYVYQRS
TTAISVVAPICYAHLAAAQMGTVMKFEDMSLSETSSSHGGITTPGAVPVPPMPKLNPEVA
SSMFFC
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgatgaagataaagcgctaccgcctcctccacctgcccttcctccaaacctt
gttcccgaggtggagcccatcaagaaaaacactctcctcccgatggcccggcgcggcact
gggtccaaaggacagaggatcccccttctcaccaatcacttcaaagtgaacttcaacaac
gctaacggccagttcttccattacagtgttgctataacgtatgaagatggccgtccggtg
gaggctaaaggtatcggcaggaagatccttgacaaggttcagcagacctataaaactgac
ttgggatccaagtacttcgcctatgatggcgagaagactctcttcaccgttggtcctctt
cccagcaacaagcttgacttctctgtcgttcttgaagacgctccttctagcaggaacaac
actggaaacggtagccccaatgagtctaatgacgctgacaggaaacgatcaaagaggccc
aatcagtccaagaagttcatggtggagataagctacgctgcaaagatccccatgcacgcc
attgcagccgctctccaaggaaaagaaactgacagccttcaagatgcgatcagagtgctt
gacgtcattctcagacagagtgcagctagacaaggctgtctcctagttcggcagtcgttc
ttccataatgacgcccagaactttgtaccaatcggtgcaggtgttgttggtgtcagaggg
ttccattcaagcttccgaacaactcagggaggcttgtccttgaacatagacacttcaaca
accatggttgtacaacctggccctgtggttgattttctcctggcgaatcagaatgtgaaa
gacccctactctgttgactggaacaaggctagacgtgctctcaagaatctcagagtcaag
gttgctccctcaaaccgagagtacaagataagtggacttagtgaaaatcgctgtaaagag
caaatgttctctcggaattctaagaacgatatgggcgaagttgtggagcatcagacgact
gtgtttgagtatttcaccgacttccgtaacatccaactgcagtactctggtgacttccct
tgcatcaacgttggcaaaccaaagcgccctacttacatccccattgagcactgtgagctt
gtgagtctccagcgttacacaaaatcacttaccaatcttcagagggcttccctggttgaa
aagtctaggcagaagccactggaaaggatgacatccctaaccactggtctgaagaacagc
aactataacgctgacttggtgttgcaagagagtggtgtcagcatcggctctagcttcacc
cacgtggagggtcgaatcttacaagcaccaaagctgagagtgggcaatggagaggacttt
caacctcgcaatgggcgttggaacttcaacaataagaaactggttgagccaaccactgtc
actaggtgggctgtggtgaacttctccgctcgctgtgacacaaaccggctcattccggac
ttgattcgctgcggcaacatgaaaggcattaacgtggagcctccttacgaagtggtcttt
caagaaagtgctcagttcaggaacgcaccaccacacatcagagttgagaagatgttcgag
cagattcagtctaagctcccggggaagcctaagttccttctttgcatcctcgcagaaagg
aagaactctcacgtttatggtccttggaagaagaagaaccttgctgagcttggaatcgtg
actcagtgcattgctcccaccgccagaatcaatgatcagtacctcaccaacgttctcctg
aagatcaacgctaagctcggtggtctaaactcactgctaactatggagcgctcacaggca
atgccgtcagttacgcaagttcctacaatcattgtcgggatggacgtttcccatggttcc
cctggccagtctgatgtaccatctgttgctgcggtggtgagctccaggcaatggccactc
atctcaaagtacagggcatgtgtgcgcacacagtctcgtaaagtggaaatgatcgacaat
cttttcaagcttgtccctggccaagaagagaagatggttgacgagggaatattcagggag
ctcttggtggacttttactccagctcccagaagaggaaaccagaccacatcatcattttc
agggatggtgtgagtgagtcacagttcaaccaggttctgaacatcgagttggatcagatg
atgcaggcatgcaagtttctcgatgaaaaatggaaccccaagttcacggtgatcattgcc
cagaagaaccaccacaccaagttcttccaggataaaggaccagacaatgttcctccaggg
actatcattgacagcaagatctgtcaccctcggaacaacgacttctacctctgcgctcat
gcggggatgattggaactacaaggccaacacactaccatgtgctgtacgatgagatcaac
tttaccacagatgacctccaggaacttgtgcattcactgtcctatgtctaccagaggagc
accactgccatctcagtcgttgcaccgatttgttatgctcacttggcggctgcacagatg
ggaaccgtgatgaagtttgaggacatgtctttgtctgagacatcatctagccatggcggg
atcacgactcctggagcagtccctgtgccacccatgccaaagttgaacccggaggttgca
agttccatgttcttctgctga
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