Brassica oleracea (wild cabbage): 106323103
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Entry
106323103 CDS
T04124
Name
(RefSeq) protein HASTY 1-like
KO
K14289
exportin-5
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106323103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106323103
03036 Chromosome and associated proteins [BR:
boe03036
]
106323103
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106323103
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
106323103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
106323103
NCBI-ProteinID:
XP_013616727
UniProt:
A0A0D3AFK8
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All DBs
Position
C1:42583951..42589303
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AA seq
1140 aa
AA seq
DB search
MMNEDLARGKDMTGADDETKTLASTVARQILLLVSHSSDSTVDADACKEAALTHLESIKT
GNVGVLSQVSFLLVAKDWPLQVRIYASKLLQHLVKLRWDELSSSEQMDISSASFELMSEL
AAANPFEECEMKSETITLVAEIFEKEEDLEMWQELFLSLVSLSSQGPLLAELALKVAKTL
SEHHIDHIKELEDNKYSHHLLQGLPDILVWLHDLLEKHFGDAKNAEGREKLELAKQHSDA
VVACLNAINSLTEWAPVPDFAEYKIIDQCASLLSSSEFCRLACMFFTLISSRERPTDDAS
GAEFDSTIIHICKVMVSLGSTNLHCIFTDSSAIALYLKQMLWFFEHYKFDLHYESLFFWL
GLMDYLTSDLKAPSYPHRKGSASEVFTGSASEVFNSFRHLDGVKRDLLLLIDDETASKML
DVSFQRMNKNDQVLLDPGTNLLSLEPSSFTYEEFCKYQKRLFVLIRLISSHKPIIASTKL
SSRTIMLIKNISVSSAPCGQQYAAAMKSQSTALESILRRLFRGTDEFAGGSSQVHSQLHV
IFEGLLQELLNANWTEPLLISAHVDYLNAMFPFLKYLPDTVASVIDKMFALLTSLPPASK
RARLYICSSMIRLAKTADKSFTPHLKGLADKMTCLQREGTLLPGEHSSLVEAFFAMTSAS
GGQREQQDSFLLLLEPVRQQWTQPEWQNEYLSTPSGFIQLCSNAPLMRSIVDTVAVFEKA
LKGCNFKKRKLNMSEIMRTHHHPLASHLPWMLPPLLKLFRVINSLSSPDAYQTLPTKLKE
AMKITEAELRSTQGKQSRKLTKGFLTYSSKGNTYDIRNWLKAIRESGYRVLNLSVSMGET
FYASIDANEVAVAFTENIWWMEFRHIKQLINSFVGCLVSSCPADMWESLLEPLLSPLLTH
CQRALDSSWTSLLREGRANVPDLIGFEGGETKLIQLERQLLIDLSRSTSDLLSKISAPEL
NTGLPVLKYSDQLVLGEMSILMDFNALKSNCLVSLLLSCKNLANSVMQFSLQACTWTDGI
TTFNLHCFFISVIHLAIMTNNGELREFVAKDLFNALIMSLTINENVNNSSILVGMCSEIF
VYLSQRHPAPRQVLLSLPCLTPDDLRDYEKALAETCEPKKQKQITRSMLSLALGISLEIK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgaggatcttgcgagaggaaaagatatgactggagctgatgatgaaacaaag
actctagctagcactgtggctcgtcagattcttctactcgtctctcattcttctgactcc
actgttgatgctgatgcttgcaaagaagccgctctaacacatcttgaatcgattaagaca
ggtaatgttggggttctgtctcaagtttcgtttcttcttgtggcaaaggattggccttta
caagttcgcatctacgcctctaagttgctacagcatttggttaaactgcggtgggatgag
ttaagctcctctgagcagatggatattagtagtgcctcctttgaattgatgtctgagtta
gctgctgctaatccatttgaagaatgtgagatgaaaagtgaaactatcactcttgttgct
gagatatttgaaaaggaggaggatctggagatgtggcaggagttgtttctctcactagtt
tccctctcctcccaaggtcctttacttgcagaattggctttgaaagtggcgaagacgctt
tctgaacatcatatagatcacattaaggagctggaagacaataagtatagccatcatctg
ttgcagggacttcctgatatcttggtttggttgcatgatcttcttgaaaaacactttggg
gatgcaaagaatgcagaagggagggagaaacttgagctggctaaacagcattcagatgca
gttgttgcttgtttgaatgccatcaactcactcacagaatgggctccagttccagatttt
gctgaatacaaaatcattgaccagtgtgcatctttactttcttctagtgagttctgccgt
ctcgcttgtatgttcttcacacttatctcctcaagagaaagacccactgatgatgcttct
ggtgctgagtttgattctacaatcatccatatctgtaaagtgatggtctctctaggctcc
acaaacttacattgcatcttcacagatagcagtgccatagctctttatctgaaacagatg
ctctggttttttgaacactataagttcgatcttcactatgagtcactgttcttctggctg
gggttgatggattatttaacctcagacctcaaggctcctagttacccacatagaaaggga
tcggcaagcgaggttttcacgggatctgcaagcgaggttttcaatagttttagacaccta
gatggcgtaaaaagggatcttttactccttatagacgatgaaaccgccagcaagatgctg
gatgtttcattccaacgcatgaataagaacgatcaagtcctccttgatcctggaacaaac
ctcctttcccttgagccatcaagttttacatatgaagagttttgcaagtaccagaagagg
ctctttgtgttgatcagactcatctcttctcacaagccaatcattgctagcacaaaacta
tcttcaagaaccatcatgcttattaagaatatatcggtttcttcagcgccttgtggccag
cagtatgcagctgctatgaagagccagagtactgctctggagagtattctgcgtaggctt
ttccgtggaaccgatgagttcgctggtggtagttcccaagttcattctcaactccacgtg
atatttgagggcttgcttcaggagctccttaatgcaaactggactgaaccactacttatt
tcagcgcacgttgactatctaaacgcaatgtttcctttcctcaagtacttgccagatacg
gttgcaagtgttatcgacaagatgtttgcacttcttacctctcttccaccagcatctaaa
cgtgcaagattgtacatctgctcatctatgatacgcctagccaaaactgctgacaaaagc
tttactcctcacttgaagggtctagctgataagatgacatgtttgcaaagagaaggaact
ttgctccctggtgagcatagcagtcttgtggaagcattttttgctatgacttctgcgtca
ggaggtcaaagggagcagcaagacagttttcttttgttactagaaccagtgcgccaacaa
tggactcaaccagagtggcaaaacgaatatctatctactccctctggttttattcagtta
tgctcgaacgcacccttgatgcggtctattgtcgacacagtcgccgtctttgagaaggct
ctcaagggatgcaacttcaagaaaaggaagctgaacatgtctgagattatgaggactcat
catcatcctctggcttctcaccttccttggatgctaccaccgctcctgaagctctttcgt
gttatcaactctctgtcttctcctgatgcttatcaaaccttacccacaaaactcaaagaa
gcaatgaagataacggaagccgagttacgtagcacccaaggaaagcaaagccgtaaacta
actaaaggcttccttacttattctagtaaaggaaacacatatgatattcgaaattggctg
aaagctattcgtgaaagcggataccgtgtgctgaatctctctgtaagcatgggagagacg
ttctacgcatccattgatgctaacgaagttgcggtggcgttcactgagaatatatggtgg
atggagttcagacatataaagcagcttatcaactccttcgtaggatgtcttgtctcatca
tgtcctgcagatatgtgggagtcattgcttgaaccgcttctgagtcctttgttgacacac
tgtcagcgagctcttgactcctcgtggactagtcttctacgggaaggcagggccaatgtt
ccggatctgatcggttttgaaggtggtgagacgaagctcatacaactggaaagacagctg
ctcatagatttatctcggtccacttcggatttgctctcaaagatctctgctcctgagtta
aacacagggcttcctgttctgaagtactcagaccaacttgttcttggtgaaatgtctatt
ctcatggatttcaatgcactcaaatccaactgtttggtgagcttactcttgagttgcaaa
aacttggcaaactcagtaatgcagttttcattacaagcatgcacatggacagatggcatt
acaaccttcaacctccattgttttttcattagcgttattcatctagccataatgacaaac
aacggagagctccgagagtttgtggcaaaagatttgtttaatgcactcatcatgagcttg
accatcaatgaaaatgtgaacaacagttccattttagttggtatgtgcagtgaaatattc
gtttacctttcccagaggcacccagctccacgacaggtgttgctgtcactcccctgtctc
actcccgatgatctgcgtgattacgaaaaggctttggcagaaacttgtgaacccaaaaaa
cagaagcagattacaagaagcatgttgtcattagctcttggaattagcttagaaataaaa
taa
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