KEGG   Brassica oleracea (wild cabbage): 106323197
Entry
106323197         CDS       T04124                                 
Name
(RefSeq) uncharacterized protein LOC106323197
  KO
K12825  splicing factor 3A subunit 1
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106323197
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106323197
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106323197
 Complex B
    106323197
 Complex C
   U2 SnRNP specific factors
    106323197
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 106323197
NCBI-ProteinID: XP_013616805
LinkDB
Position
C2:3921466..3923949
AA seq 827 aa
MALNNDNDKKFSFLQRSDPCHAYYQRKLNYYRKEAQVTRPHAPATTTHDCSVADGEEETF
CLLPTYSTLWSSSYSRPAGISLKDLYIMKLTAQFIARYDMHFLRALKEHVAQNPKPRFDF
LKPTSSRFNFCGGLVRGYASVIRPYIESLMRDGGGIMPLVLPSSVCWTRDDDYDGMPLCL
QFFFERLQLEKLEAGDKMALVDLHAFVSGVDFFAQRDNQSFACVMSKTPHLSKMMYEWPQ
MQPSKLINSYDDDDDDDDDDTEPELIDAPPSYEILEKQLTLKELGIIKVTAMFVARYGEN
FRRDLMEIVSMNPLFEFLRPSDCKCSKFFTSLVRVYSNVIMPSDKLWYGDDCTDSALEFF
SSCLQLEKLEKLENGDETAAIDLHALVGGVDCFSHMSESLFLAFAPQPERLSTMVKRRGC
QLLTEFRKAQPDGGEARPYRFQSNFKFPEKGIKLKELGVIILTAQFVERYGENFRRGLRR
RVVMNTQFGFMVFGDRRHDFYCGILCAYSSVLRPCKRMKKSDACTDTVLEVFFEILQSQE
EGEGIELHDFVGGVDSFAHVEDEQYSVVVPAPVHVLMNMIPRTLRLPDTLLLPPVKSSSI
HDPAPRRPHDLASPTRRYTLREDCIIKVTAQFVARYGTKFTGALARRVAKTTQFEFMNPT
SGRSRFYTWYVERLSEVLKPYKKGDAFYQEKKRDACMNTVLEGFFSCLDRLQQEEDEAVG
VVALHGFVDVVDCFASMDHVLNQHLTPPGSQVHLGAYGQPLMGMMQPAPPKLGLMSLPPP
LPLPEEPEPKRRKFDVSALAPEDRLHNFQGWSTIRVFVPNVGEVVIR
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggctcttaataatgataatgacaaaaaatttagctttctacagaggtcagacccttgt
cacgcatactaccagcgtaagcttaattattaccgtaaggaggctcaggttaccaggcct
catgctccggctactactactcatgattgctctgtagccgatggtgaagaagaaaccttt
tgtctgttgcctacttatagtaccctgtggagtagttcgtacagtcgtcctgctggtatc
tcactcaaggatctatatattatgaagctcactgctcagtttatagcacggtacgacatg
cattttctgcgggctttgaaggagcacgtggctcagaatccgaaacctcggtttgatttt
ttgaagccgactagtagcaggtttaatttctgtggtgggcttgttcgtggttacgccagc
gtgataaggccatacatagaatctctgatgagagatggtggtggcattatgccgttagtg
ctgccatccagtgtgtgttggacgagagatgatgattatgacggtatgccactctgtctt
cagtttttcttcgaacgtcttcagttggagaaactggaggctggggataagatggctttg
gttgacttgcatgctttcgtgagtggtgtcgactttttcgcccagagggataatcaatcc
tttgcttgtgtcatgtcaaaaactccacacctttcgaagatgatgtacgaatggccccaa
atgcagccatcgaagcttattaatagttatgatgatgatgatgatgatgatgatgatgat
acagaaccggagctaatagatgcacctccttcatatgaaatccttgaaaagcagctcacg
ctcaaggagcttggtattattaaggtcacagcgatgtttgtggctcggtacggtgagaac
tttcggcgggatctgatggagatagtctctatgaaccctctgtttgagtttctgaggcca
agtgattgcaagtgttcaaagttcttcacctcgcttgttagagtgtattccaatgttata
atgccttccgacaagctgtggtacggtgatgattgtacggattccgctctcgagtttttc
tccagctgtctccagctggagaagctggagaagctggagaacggagatgagacggctgct
attgatctgcatgcgcttgtgggtggtgttgactgttttagtcacatgagtgaaagcctc
tttcttgctttcgctccacaacctgaacggctttcgactatggtgaaacgacggggatgt
cagcttcttactgaatttcgtaaggctcaacctgatggaggagaagctcggccttaccgt
ttccaaagtaattttaagttccctgaaaaggggatcaaactcaaggagcttggtgttatt
atcctcacggcgcagtttgtggagcggtacggtgagaacttccggcggggtctgaggagg
agagttgttatgaacactcagtttgggtttatggtgtttggtgacaggaggcacgatttc
tattgcgggattctttgtgcgtatagcagcgtattaaggccttgcaaaaggatgaagaag
agtgatgcttgtacggataccgttcttgaggtgtttttcgagattctccaatcgcaggag
gagggggagggaattgaattgcatgattttgtgggtggtgttgactcttttgctcacgtg
gaggatgaacagtattctgttgttgtgccagcacctgtacacgttctgatgaatatgatc
ccacgaacgctcaggctgccggatacgcttttgctgcctccggtgaaatcttcaagtatt
catgatcctgctccaagaagacctcacgatcttgcatctcctactaggaggtacacactc
cgggaggattgtattatcaaggtcactgctcagtttgtggcgcggtacgggacgaagttt
acgggggctttggcgaggagagtggctaagacaactcagtttgagtttatgaacccgact
agtggcaggtcccgtttctatacatggtatgttgagaggttatctgaagtattaaagcct
tacaaaaaaggcgatgctttttatcaagaaaaaaagcgtgatgcttgtatgaacactgtt
cttgagggttttttcagttgtttggatcgtctccagcaagaggaggatgaagcagtgggt
gtcgtcgctttgcatggttttgtggatgttgttgactgttttgcttccatggatcatgta
ttgaaccagcaccttactccaccaggatcccaagttcatcttggtgcttacggtcagcct
ttaatggggatgatgcaaccggcaccaccaaaactgggtctaatgtctcttcctccacca
ctgcctctacctgaagaaccagagccaaagagacgaaagtttgacgtgtcagctcttgct
ccagaagaccggttacacaattttcagggttggtctacaatcagggtttttgttccaaac
gtaggtgaagttgttattagataa

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