Brassica oleracea (wild cabbage): 106323250
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Entry
106323250 CDS
T04124
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106323250
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106323250
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Helicases
106323250
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106323250
NCBI-ProteinID:
XP_013616860
UniProt:
A0A0D3A1W1
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Position
C1:complement(2168458..2171592)
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AA seq
625 aa
AA seq
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MGKAKFKPVDDVKPEEVEKVEEVEEQRDGGEVAEEEEEEKEKSFEELGLDPRLIRALSKK
GIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSDSGRKKKPAPCAFV
LVPSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSDMRNALAGLPEILVTTPACIPK
CFADGVLDPAAISESLEILVLDEADLLLSYGYEDNLRSVTSIVPRRCQCLLMSATTSSDV
EKLKKLILHNPVVLTLQEGSDKEEPVPSNVQQFWISCSAQDKLLHILALLKLEVVQKKVL
IFINTIDMGFKLKLFLEKFGIKTAILNGELPQNSRLHILEQFNAGLFDYLIATDDNNQTK
EKEEVKGDDNKESKKNKRRFKPKLDAEFGVVRGIDFKKVHTVINYDMPQSVTGYIHRIGR
TGRAYSSGSSVSLVSPGEMEGFEEIKSFLAGEEDKDSDIITPFPLLTENAVESLRYRAED
VAKSVTKISIRESRAQDLRNEIINSEKLKSHFEANPRDLDLLKHDKLLSKTAPSPHLRDI
PEYLVDAKTQEASKMVKLARAAMGNSRRSGGGGNSKKKRSRKGGDPLKTFNANGSKRGRG
GGGVGQKKDGKGSSDGLANKKQKTV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggcgaagtttaaacctgtggatgatgtgaaaccggaagaagttgagaaagta
gaggaagttgaagaacagagagacgggggagaagtagcagaagaagaagaagaagagaaa
gagaagagctttgaggagctagggcttgaccctcgtctcattcgtgctttatctaaaaag
ggtattgagaaaccaactcctattcagcaaacagctattccttacatcctggaagggaaa
gatgtggttgctagagctaagactggctcagggaagaccttagcttaccttcttcccttg
cttcagaagctgttttcggattctgggaggaagaagaagcctgctccttgtgcttttgtt
ctcgttccttctcgtgagttgtgtcagcaggtgtacacggaggtttcttggcttattgag
ttgtgtcgtgttcagcttaaagctgtgcagttgactagtagcatgcctgtatctgatatg
cgtaacgcattggctggcttgcctgagattctagtcaccacacctgcttgtattccaaaa
tgtttcgcagatggagttttagaccccgcagctatcagtgaatcgcttgagattttggtt
cttgatgaggcagatcttttgttgtcctatggatatgaagataatctaaggtcggtaact
tcaatagtcccaagacgttgccaatgcctccttatgtctgctaccacaagttctgatgtt
gaaaaattgaagaaattgattctgcacaacccggtcgttttgaccttgcaagaaggttct
gacaaggaagagcccgtcccaagcaatgttcagcagttttggatttcttgcagtgctcag
gataaactactacacattcttgctctcctgaagctagaggttgttcagaagaaagttctg
atattcatcaatactattgacatgggtttcaagctgaagctattcttggaaaagtttgga
atcaaaactgcaatcttaaacggggagttgcctcagaactctcggcttcatatccttgag
caattcaatgcaggactctttgattatttgattgcaacggatgataataaccagacaaaa
gaaaaggaagaggttaaaggtgatgataacaaggagagtaagaaaaacaaaaggcgtttc
aaaccgaagcttgacgctgagtttggtgtagtcaggggaattgacttcaaaaaagttcac
acggtcataaactacgatatgcctcaaagtgtgacaggatacattcatagaattgggcgt
actgggagagcatatagcagcggttcttccgtttctctcgtttctcctggtgagatggaa
gggtttgaagaaatcaaatccttcttagcaggtgaagaggacaaggatagtgatatcatc
acacctttccctttgttgactgaaaatgctgttgagtctttaagatacagagctgaggat
gttgcaaagagtgttacaaagatttcgattcgagaatcacgagctcaggatttaagaaat
gagataataaactccgaaaagttaaagtctcattttgaagcgaatccaagagacttggat
ctattgaaacatgacaagcttctgagcaagactgcgccttcaccgcatctaagggacatc
cctgagtatctagtggacgcaaagactcaagaagcaagcaagatggtcaagctagccaga
gccgctatgggaaacagtagaagatcaggtggaggcggaaactcaaagaagaaacgatca
agaaaaggcggtgacccactaaaaaccttcaacgccaacggatctaagagaggacgcggt
ggtggcggtgttggtcagaagaaagatggtaaaggatctagcgatggcttggctaacaag
aaacagaagacagtttaa
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