Brassica oleracea (wild cabbage): 106323872
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Entry
106323872 CDS
T04124
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106323872
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
106323872
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106323872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
106323872
NCBI-ProteinID:
XP_013617378
UniProt:
A0A0D3A6P2
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All DBs
Position
C1:13417769..13422034
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AA seq
631 aa
AA seq
DB search
MPALTRNKKKGAKSQTPPLIKRTKSNPTPPPKKAAKSHKPPLKKQRKGVSDEKPEVSNDE
EEEEEEVSEQSDEGDELGSDFFSDGDEEEDTEPLGDDFLDGNDDEERTLGSDSDSDLEKE
SKAIDEERERQERDAKDELQMNIKEQPDEFRLPTKKELEEEASGPPDLPALQTRIKEIVR
VLSNFKDLRPEGVKRKEFVEQLKADLASYYGYNEFLIGTLVEMFPPVELMELIEAFEKQR
PTSIRTNTLKTRRRDLADVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYLAGFYML
QSASSFLPVMALAPRENERVVDMAAAPGGKTTYVASLMKNTGIIYANEMKVPRLKSLTAN
LHRMGVTNTIVCNYDGRELPKVFGPNSVDRVLLDAPCSGTGVISKDESVKTSKSANDIRK
FADLQKQLILAAIDLVDAESKTGGYIVYSTCSIMIPENEAVIDYALKKRDVKLVPCGLDF
GQAGFSRFREHRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSNETKASEGDEPVETKEQA
QLSSDEDDDDESIKELKKPSGANVDMNKQRISISKANNKGKKNKNFKTENANVEGPRKQK
KKRSQWKAEIAQAREDKRKVMRENTKEPGRR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttacgcgtaacaagaagaagggagctaagtcgcagactcctccactgatt
aagcggactaaatcgaatcccacgcctccaccgaagaaggcggcgaagtcccataagcct
ccgttgaagaaacagaggaaaggtgtttccgatgagaagcctgaagtttctaatgatgag
gaagaagaagaagaagaagtgagtgaacagtctgatgaaggagatgaattgggttctgac
tttttctcagatggtgatgaggaggaggatacagaacctttgggcgacgactttctcgat
ggtaacgatgatgaggagagaactttgggttctgattctgactctgatctcgagaaggaa
agtaaagctattgacgaagaacgtgaaaggcaggagcgagatgcgaaagatgagttgcag
atgaacattaaggagcaacctgatgagtttcgcctacctaccaaaaaggaacttgaagaa
gaggcaagtgggccaccagatcttcctgccttgcaaacgaggatcaaagagattgttaga
gtgctgtcgaattttaaggatttgaggccagaaggagtcaagaggaaggagtttgttgaa
cagcttaaggctgatcttgcttcttactacggctataatgagtttctcattggaactctt
gttgagatgtttcctcctgttgaactcatggaactaatcgaagcttttgaaaagcaaagg
cctacttctatacgtaccaacactcttaagactcggagacgggatctggctgatgtactt
ttgaacagaggagttaatctagacccattaagcaagtggtcaaaagttggacttgtcgtt
tatgattcacaagttccaattggtgcaactcctgaatatttggctggtttctatatgttg
caaagtgctagttccttcttgccagtgatggctcttgctcctcgagagaacgagcgcgtt
gtggacatggctgctgcccctggtggtaaaacaacttatgttgcttccctaatgaagaat
actggcataatatatgcaaacgagatgaaagtacctaggcttaagtcactcactgccaat
ctgcatcgcatgggggtgacaaataccatagtttgtaactatgatggaagagagctaccc
aaggtttttggtccgaactcggtagatagagtattgttggatgctccttgcagtggaact
ggagttatatcaaaagatgaatcagttaaaacttccaaaagtgccaatgacataaggaaa
tttgctgatttgcaaaagcaacttatacttgctgctattgatttggtggacgccgaatcc
aaaaccggtggatatattgtttactcaacatgctccattatgattcccgagaacgaagct
gtgatcgattatgccttaaaaaagagggatgtcaaactcgttccatgtggacttgatttt
gggcaagcaggatttagtagatttagagaacaccggttccaccctactttggagaaaact
agacgcttctatccccacgtccacaacatggacggattctttgtggcaaagctgaagaag
atgagcaatgaaacgaaggcttcagaaggtgatgagccggttgaaacaaaagagcaagct
cagttgtctagtgatgaagatgacgatgatgagtccattaaggagttgaagaaaccttct
ggagccaatgtagacatgaacaaacaaagaatttcaatctcaaaggcgaacaacaaaggc
aaaaagaacaaaaacttcaaaaccgaaaatgctaatgtggaaggacccaggaagcaaaag
aagaagagatcacaatggaaggctgaaattgcacaagctagggaagataaaagaaaagtc
atgagagagaatactaaggagcctgggagaagatag
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