KEGG   Brassica oleracea (wild cabbage): 106324526
Entry
106324526         CDS       T04124                                 
Name
(RefSeq) nucleolin 2-like
  KO
K13126  polyadenylate-binding protein
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03015  mRNA surveillance pathway
boe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106324526
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106324526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106324526
   03041 Spliceosome [BR:boe03041]
    106324526
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     106324526
   mRNA cycle factors
    Stress granule specific factors
     106324526
Spliceosome [BR:boe03041]
 Complex C
  Other components
   Complex C specific factors
    106324526
SSDB
Motif
Pfam: RRM_1 RRM_11 DUF8400 RRM_MUD2_C Nup35_RRM_2 RRM_ESF1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 106324526
NCBI-ProteinID: XP_013617937
LinkDB
Position
C2:complement(50274536..50280206)
AA seq 467 aa
MKIQALTTQLLDLRQRRTQMMMEHWRGARRGALTATPDRLCFFQNVGQVVRVRLVVDNRG
VFMGDAFVEFASTDQANKALKEKKCDKFNNWRKIVLGVADKGEGAPFFPPKYCIDHKVWY
LEDEEDYLQQEVEEDEDYLQQEKMRHLPILRYYYAFVEFVSPERANLALKKKNGEYLHDH
EILLMKRLEVDTPHSAETVVTVRDKTLFVDHLSKQTKISDIINFFKDVGEVVHVRLMVGK
GTGLMGSGYVEFASAAEAEKAMEKKNGKYLNRRKLYLSFVKEPSRFKYCIDYKVWFEDYV
QRENLLLQENASMEGLDETPDFVEEVSSSKKTLFADISHKKILRFNIPNIISYFEDVGEV
ASVRLIVDRRGISSGCCCVEFATCTESNKAMRINQHVKGIFVKMLEIAPYPFRPKYNLTD
LAENLWYEDELRREGFGLPTRPKPEKEPCVVRKITFCGQRITFSDED
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgaagattcaggcgctcacgacacagctgctggacctgaggcagcggaggactcagatg
atgatggagcattggagaggcgctcgaagaggcgcactgaccgcaacgcctgatcgcctc
tgtttcttccaaaacgttggacaagttgttcgtgttcgacttgtcgtcgacaaccggggt
gttttcatgggcgatgcctttgttgagtttgcttctaccgaccaagcaaacaaggcactg
aaagaaaagaagtgtgataagtttaataactggcgcaaaattgttcttggtgtggctgat
aagggagagggagctccattctttccacccaagtattgcatagatcacaaagtttggtac
ctcgaagatgaagaagactaccttcaacaagaagtagaggaagatgaggactaccttcaa
caagaaaagatgagacacctcccaatactgaggtactattatgcctttgttgagtttgtt
tctcctgaacgagctaatttggcgctgaaaaagaagaatggtgaatacttgcacgatcat
gagattttgttgatgaaaagacttgaggtggacactccccattctgctgagacagttgtc
actgtaagagataagacgctctttgttgaccatctctctaagcaaactaaaatatcagat
atcatcaatttctttaaagatgttggagaagttgttcatgttcgtcttatggtaggcaaa
ggtaccggtctgatggggtctggctacgttgagtttgcttctgctgccgaagctgagaag
gcgatggagaagaagaacggcaaatatttaaacagacgcaagctttatttatctttcgtt
aaggagccttcacgattcaagtattgcatagattacaaggtttggttcgaagactatgtt
cagcgagaaaaccttctgctacaagaaaatgcatcaatggaaggacttgatgaaactcca
gactttgttgaggaagtttcatcgagtaagaagactctctttgccgatatctcccataaa
aaaatcctgcgttttaacataccaaatatcatcagttacttcgaagatgttggagaagtt
gctagtgttagacttattgtagaccgccggggcatatcttcgggctgttgctgtgttgag
tttgctacttgtaccgaatcaaataaggctatgcgaattaaccagcatgttaaggggatt
tttgtcaagatgcttgagatagctccataccctttccgacccaagtacaaccttacagac
cttgcagagaacctttggtacgaagacgagcttagacgagaaggctttggtttgccgacc
agaccaaagccggagaaagagccctgcgtcgttcgaaagattaccttctgcggtcagagg
attaccttctctgacgaagactaa

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