Brassica oleracea (wild cabbage): 106324698
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Entry
106324698 CDS
T04124
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106324698
03036 Chromosome and associated proteins [BR:
boe03036
]
106324698
Transcription factors [BR:
boe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
106324698
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
106324698
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
YL1
Motif
Other DBs
NCBI-GeneID:
106324698
NCBI-ProteinID:
XP_013618114
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All DBs
Position
C2:45974244..45977792
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AA seq
646 aa
AA seq
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MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTSFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFV
GDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSIS
DDLMNTRFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDE
EDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKA
LATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKW
RQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgttcattccttcaacaacatctccctcagcggccgcggcggatcgaaccct
ggactccttaaaatcaactcaggagggatccaatggaagaagcaaggcggcggcaaagct
gtggaggtcgacaaatcggacatcgtgggcgtgagctggatgaaggttccgaggactaac
cagcttggtgtcaaaaccaaagacgggttgtactataagttcattggctttcgtgatcag
gatgttgcgagcttgaccagctttttccaaagtgcgtttgggaaaacgcctgaggagaag
cagctctctgttagtggtcgcaattggggtgaggtggatttgaatgggaataatttaaca
tttttggttggtggaaagcaagcttttgaagtgtctctggctgatgtgtcacagactcag
ctccaagggaaaaatgacgtcttgttggagtttcatgttgatgacactgctggtgccaat
gagaaagactcgttgatggagataagttttcatattcctaataccaacacccagtttgtt
ggtgatgaaactcgtccccctgctcaagttttccatgacaatatcttgaaagtggctgat
gttggtgctggagttgaggaggccgtcgtcacatttgagggtattgcaatcctcactccc
aggggtcggtacaatgtggagcttcacctttctttcttgcgtctgcaaggacaagccaat
gactttaaaattcagtacagtagtgttgtccgcttgtttttgcttccaaagtcaaaccag
ccacacacgtttgttgttatctctctagacccaccaatccggaaaggtcagaccctgtac
ccccatattgtgatgcagtttgagacagactctgtcgtcgaaagtgaactctcaattagt
gatgatcttatgaatacaaggttcaaggacaagttggaacgatcatataagggtctcata
catgaagtgttcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaaccaggg
aagttccgcagttcccaagatgggtttgcagtgaaatcatctcttaaggcagaagatggt
gttctctatcccctcgagaagggctttttcttcttacctaaacctccaacgcttatactt
catgatgagattgactatgtggagtttgaaaggcatgctgctggtggtgctaacatgcat
tacttcgatctttccataagactgaaaactgatcatgaacatctcttccggaatattcag
aggaatgagtatcacaatctctattccttcataagctctaagggtttgaagatcatgaac
cttggaggtgcgggtaccgcagaaggtgtagctgctgttcttcaggacaatgatgatgac
gatgctgttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgatgag
gaggacgaagactttgttggggctgaggatgacgacggtggctcaccgactgatgattct
ggcgaggacgacgactctgatgctagtgacgctgacggaggcgagaaagagaaatctgtt
aagaaggagcccaagaaagaggcttcgtcttcgaaaggattgcctctgaagaagaaagcg
ttggccacagaagaaggaagtagtaagaagaagacgcagaagaagaagaaggatcccaat
gcacctaagaaggcaatgtctggtttcatgtacttctcccaaatggaaagagacaacata
aagaagagtaacccaggaataggatttggagatataggaaaggtgcttggagacaagtgg
cgtcagatgtctgctgaggaaaaagagccgtatgaagctaaggcgcaagttgacaagaag
cgatacaaggatgagattagcgattacaagaaccctcagcccatgcttgtagactctgga
aacgattccgacagtaactaa
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