KEGG   Brassica oleracea (wild cabbage): 106324698
Entry
106324698         CDS       T04124                                 
Name
(RefSeq) FACT complex subunit SSRP1
  KO
K09272  FACT complex subunit SSRP1/POB3
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:boe03000]
    106324698
   03036 Chromosome and associated proteins [BR:boe03036]
    106324698
Transcription factors [BR:boe03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    106324698
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     106324698
SSDB
Motif
Pfam: PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 HMG_box_5 YL1
Other DBs
NCBI-GeneID: 106324698
NCBI-ProteinID: XP_013618114
LinkDB
Position
C2:45974244..45977792
AA seq 646 aa
MTDVHSFNNISLSGRGGSNPGLLKINSGGIQWKKQGGGKAVEVDKSDIVGVSWMKVPRTN
QLGVKTKDGLYYKFIGFRDQDVASLTSFFQSAFGKTPEEKQLSVSGRNWGEVDLNGNNLT
FLVGGKQAFEVSLADVSQTQLQGKNDVLLEFHVDDTAGANEKDSLMEISFHIPNTNTQFV
GDETRPPAQVFHDNILKVADVGAGVEEAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTLYPHIVMQFETDSVVESELSIS
DDLMNTRFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG
VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLSIRLKTDHEHLFRNIQ
RNEYHNLYSFISSKGLKIMNLGGAGTAEGVAAVLQDNDDDDAVDPHLERIRNQAADESDE
EDEDFVGAEDDDGGSPTDDSGEDDDSDASDADGGEKEKSVKKEPKKEASSSKGLPLKKKA
LATEEGSSKKKTQKKKKDPNAPKKAMSGFMYFSQMERDNIKKSNPGIGFGDIGKVLGDKW
RQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPMLVDSGNDSDSN
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgacggacgttcattccttcaacaacatctccctcagcggccgcggcggatcgaaccct
ggactccttaaaatcaactcaggagggatccaatggaagaagcaaggcggcggcaaagct
gtggaggtcgacaaatcggacatcgtgggcgtgagctggatgaaggttccgaggactaac
cagcttggtgtcaaaaccaaagacgggttgtactataagttcattggctttcgtgatcag
gatgttgcgagcttgaccagctttttccaaagtgcgtttgggaaaacgcctgaggagaag
cagctctctgttagtggtcgcaattggggtgaggtggatttgaatgggaataatttaaca
tttttggttggtggaaagcaagcttttgaagtgtctctggctgatgtgtcacagactcag
ctccaagggaaaaatgacgtcttgttggagtttcatgttgatgacactgctggtgccaat
gagaaagactcgttgatggagataagttttcatattcctaataccaacacccagtttgtt
ggtgatgaaactcgtccccctgctcaagttttccatgacaatatcttgaaagtggctgat
gttggtgctggagttgaggaggccgtcgtcacatttgagggtattgcaatcctcactccc
aggggtcggtacaatgtggagcttcacctttctttcttgcgtctgcaaggacaagccaat
gactttaaaattcagtacagtagtgttgtccgcttgtttttgcttccaaagtcaaaccag
ccacacacgtttgttgttatctctctagacccaccaatccggaaaggtcagaccctgtac
ccccatattgtgatgcagtttgagacagactctgtcgtcgaaagtgaactctcaattagt
gatgatcttatgaatacaaggttcaaggacaagttggaacgatcatataagggtctcata
catgaagtgttcaccaccgtgttgcgttggctgtctggtgcaaagatcactaaaccaggg
aagttccgcagttcccaagatgggtttgcagtgaaatcatctcttaaggcagaagatggt
gttctctatcccctcgagaagggctttttcttcttacctaaacctccaacgcttatactt
catgatgagattgactatgtggagtttgaaaggcatgctgctggtggtgctaacatgcat
tacttcgatctttccataagactgaaaactgatcatgaacatctcttccggaatattcag
aggaatgagtatcacaatctctattccttcataagctctaagggtttgaagatcatgaac
cttggaggtgcgggtaccgcagaaggtgtagctgctgttcttcaggacaatgatgatgac
gatgctgttgaccctcatcttgagcgtatcagaaaccaagctgctgatgagagtgatgag
gaggacgaagactttgttggggctgaggatgacgacggtggctcaccgactgatgattct
ggcgaggacgacgactctgatgctagtgacgctgacggaggcgagaaagagaaatctgtt
aagaaggagcccaagaaagaggcttcgtcttcgaaaggattgcctctgaagaagaaagcg
ttggccacagaagaaggaagtagtaagaagaagacgcagaagaagaagaaggatcccaat
gcacctaagaaggcaatgtctggtttcatgtacttctcccaaatggaaagagacaacata
aagaagagtaacccaggaataggatttggagatataggaaaggtgcttggagacaagtgg
cgtcagatgtctgctgaggaaaaagagccgtatgaagctaaggcgcaagttgacaagaag
cgatacaaggatgagattagcgattacaagaaccctcagcccatgcttgtagactctgga
aacgattccgacagtaactaa

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