Brassica oleracea (wild cabbage): 106324712
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Entry
106324712 CDS
T04124
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106324712
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
106324712
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Other ribosome biogenesis factors
106324712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
Methyltransf_31
FtsJ
PCMT
Methyltransf_4
RrnaAD
ASPP2-like_RA
RsmF-B_ferredox
AcetylCoA_hydro
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
106324712
NCBI-ProteinID:
XP_013618138
UniProt:
A0A0D3AXG3
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All DBs
Position
C2:48843285..48846961
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AA seq
489 aa
AA seq
DB search
MARHKSNAPPKVTRQPRKQQQSSGAERSALYARREAAKILHTVLRGDAERRAVASIKSLV
FSPSVRNKRGTFALVCETLKYLNVIKDVLGIANVLNSKWKRQEPLVYIICYDILFGKETP
SIGDAEKFLVRRKDALLSGLATLLVRKRVKSVGELLDLSQLNGHIKPRYVRVNTLKMDVD
SAVKELEKLYKVQKDDTVPDLLVMPPGSDLHAHPLVMNGRIFLQGKGSSMVAAALQPEAG
WEVIDACSAPGNKTVHLASLMKGQGKIIACELNEERVKRLEQTIKLSGATNIEVFHGDFL
SLNPEDPSFAKVRAILLDPSCSGSGTITDRLDHLLPSHSADNTNYDSIRLHKLAVFQKKA
LAHALSFPQVERVVYSTCSIHQIENEDVVSSVLPLASSLGFKLATPFPQWQRRGLPVFAG
SEHLLRMDPVEDKEGFFIALFTKTNNLDNPKASELPEGECRRRHKRFYPFLWPKVFFRAW
NGRLHGSRR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcacaaatcaaacgcgccgccgaaagtcacacgacagccgcggaaacagcaa
caatcctccggcgccgagagatcagctttgtacgccaggagggaagctgccaaaatcctc
cacaccgttctccgaggcgacgcagagcgccgagccgtcgcttcgataaagtcactcgtc
ttcagcccttccgtacgcaacaaacgcggcaccttcgctctcgtctgcgagacgctaaag
tatcttaatgtgataaaggatgttcttggaatcgctaacgtgttgaatagcaaatggaag
aggcaagagccattggtctacatcatttgctatgatatccttttcggcaaggagactcca
tcgattggtgatgctgagaagtttcttgtgcggcgtaaagatgctctactgtcaggttta
gccacgcttcttgtgaggaagagagttaaaagcgttggagagttgttggatctttctcag
cttaatggtcatataaagccacgttatgttcgtgtaaatacacttaagatggatgtagat
tcagcagtgaaggagctggagaaactgtataaggtgcagaaggatgacacagttcctgac
ttgttggtgatgccacccggcagcgatctgcatgctcatcctttggttatgaatgggcgt
atatttttgcagggaaagggaagttcaatggtagcagcagcactgcagccagaagcagga
tgggaggttattgatgcctgttcagctccaggtaacaaaactgttcatcttgcttctctt
atgaaaggacaaggaaaaatcatagcgtgcgagctaaatgaagaacgagtaaagcgtttg
gaacagactattaagctgtctggtgctaccaatattgaagtctttcatggtgattttctg
agtctaaatccggaagatccttcttttgcaaaggttcgagctatattgttggatccttca
tgctctggctctggaaccattacagatcgtctggaccatctccttccttctcattcagca
gataacacgaactatgactccataagactccacaaactcgctgttttccagaagaaggct
ctggcccatgcactctcctttccacaggttgagagagtagtatacagcacatgctcaatc
caccagatagaaaacgaagatgtggtctcatctgtattacctctggcttcatccttgggc
ttcaaactcgctaccccttttcctcagtggcagcgtcgtggtctccctgtattcgctgga
tctgaacatttactcaggatggatccggttgaggacaaagaagggttcttcatcgctttg
ttcaccaagacaaacaaccttgataatccaaaagcgtctgagcttcctgaaggagagtgt
agacgaagacacaaacggttttatccatttctttggcccaaagtgttcttcagagcttgg
aatgggaggttgcacgggtccaggaggtga
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