Brassica oleracea (wild cabbage): 106324775
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Entry
106324775 CDS
T04124
Name
(RefSeq) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106324775
03083 Polycomb repressive complex
106324775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106324775
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
106324775
Histone modification proteins
HAT complexes
HATB complex
106324775
HDAC complexes
Sin3A-HDAC complex
106324775
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106324775
PRC2.2
106324775
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
106324775
Heterochromatin formation proteins
Other heterochromatin formation proteins
106324775
Chromatin remodeling factors
NuRD complex
106324775
NuRF complex
106324775
NuRF complex (fruit fly)
106324775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD_LRWD1
eIF2A
NBCH_WD40
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Nbas_N
Motif
Other DBs
NCBI-GeneID:
106324775
NCBI-ProteinID:
XP_013618211
UniProt:
A0A0D3AL96
LinkDB
All DBs
Position
C2:complement(8587259..8589484)
Genome browser
AA seq
419 aa
AA seq
DB search
MAKDDEEMREEIEERLISEEYRIWKKNTPFLYDLVIAHLLEWPSLTVEWLPDREEPSGKD
YSVQKMILGTHTHVNESNYLMLAQVQLPLDDAEYDDERAEFGGFGSATGKVQVIQKINHE
GELNRARYMPQNPFMIATKTVNAEVYVFDYSKHPSKPALDGACNPDLRLRGHSSEGYGLS
WSTLKQGHLLSGSDDAQICLWDINATPKNKTLDAHQIFKAHEGAVEDVAWHLRHEYLFGS
VGDDQYFFIWDLRSPSASRPVQSVAAHSMEVNCLAFNPLNEWIVATGSTDKTVKLFDLRR
LSNALHSFDGHKEEVFQVGWSPKNETILASCCFGRRLMVWDVNRIDEEQTAEAAEDGPPE
LLFTHGGYAAKISDFSWNPCDDWVISSVSEDNILQIWQMTETIYHDEDDAPGEEPLRGS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacgacgaggagatgcgagaagagatcgaggagcgactgatcagcgaagag
tacaggatctggaagaagaacactcctttcctctacgatctcgtcatcgcccacctcctc
gagtggccttcccttactgtcgaatggctccccgaccgcgaggagccgtccgggaaagac
tactccgtccagaagatgattctcggcacccacacccacgtgaacgagtccaattacctg
atgctggctcaggttcagcttccccttgacgacgccgagtacgacgatgagagggccgag
tttggtgggtttggctccgccaccggaaaggtgcaagttattcagaaaataaatcacgaa
ggggagctgaaccgagctcgctacatgcctcagaaccctttcatgattgctaccaagacg
gttaatgcggaggtgtatgtgtttgattacagcaagcacccttctaagccagcgcttgat
ggtgcttgcaaccctgatctgaggctcagaggtcacagctctgaagggtatggcctgtct
tggagtacgctcaagcagggtcatttgctcagcggctctgatgacgctcagatctgcttg
tgggatattaacgccactcctaagaacaagactcttgacgctcaccagatctttaaggct
catgaaggcgcagtggaagatgttgcatggcatctgagacatgaatacctgtttggatcc
gttggagatgatcagtatttttttatatgggatctgcgttctccatctgccagtagacca
gtacagtctgtggctgctcactccatggaggttaactgcttagccttcaatccacttaat
gagtggattgtggcgacagggtcaactgataagactgttaaattattcgatctgcggagg
ttaagcaatgctcttcactcatttgatggccataaagaggaggttttccaagttggttgg
agcccgaaaaacgagactatcttagcctcatgttgcttcggtagaagacttatggtttgg
gatgttaacaggattgatgaggagcagacagcagaggctgcggaggacggcccaccagag
ctgctgtttacacatggtggttacgccgccaaaatttcagatttctcatggaacccttgt
gacgattgggtaatttccagtgtatctgaggacaacatactccaaatatggcaaatgact
gagaccatatatcatgatgaggatgatgctccaggggaagaaccattaagaggttcctag
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