KEGG   Brassica oleracea (wild cabbage): 106325086
Entry
106325086         CDS       T04124                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4 isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03020  RNA polymerase
boe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106325086
  09124 Replication and repair
   03420 Nucleotide excision repair
    106325086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106325086
   03400 DNA repair and recombination proteins [BR:boe03400]
    106325086
Transcription machinery [BR:boe03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106325086
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106325086
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 106325086
NCBI-ProteinID: XP_013618563
LinkDB
Position
C2:41602447..41604044
AA seq 237 aa
MSEKGGKGFKSSLKSSYGSGKDDNATKSKKTRKVQFDPQGPRESKYTFLQESDDQIQGSS
AKGGKGSKGRKSALSKESQPLELKTDKGLVHSATFSTKAPPPFVLHVNICVMVFAELPEN
AKCLMDCEAFEILQGIKEQMAVLSEDPSVKLPVSFDRGLEYVKYGRCYMNPQSVRQILEP
LKKHGVSESEMCVIANVCPESIDEVFAFLPSMKGRKDKITEPLEEALMKLSKLKRSA
NT seq 714 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaaagggttcaaatcttctctcaaatcctcttatgggtccggc
aaggacgataacgcaaccaagtccaagaagacaaggaaagtccagtttgatcctcaaggc
ccgcgagagtccaagtacacgtttcttcaagagtctgatgaccagattcaaggttcttct
gctaaaggtgggaagggaagcaagggtaggaagagtgctctgtctaaagagtctcagccg
cttgagcttaagactgataagggtttagtacattctgctactttctctaccaaggccccc
ccaccctttgttctgcatgttaatatatgtgtgatggtgtttgcagagcttccggagaat
gcaaagtgcttgatggattgtgaagcttttgagattctgcaaggcatcaaggagcaaatg
gctgtgctatctgaagatcctagcgtaaagcttcctgtgtcgttcgacagaggactggag
tatgtgaagtatggtcgttgctacatgaatcctcagtctgtcagacagatccttgagcct
ctgaaaaagcatggtgtttctgaaagcgagatgtgtgtgattgccaatgtctgtccagaa
agcattgatgaagtctttgcttttcttccatccatgaagggaagaaaagacaagatcact
gagcccttagaagaggcattgatgaagctctccaagctcaaaagatctgcttaa

DBGET integrated database retrieval system