Brassica oleracea (wild cabbage): 106325090
Help
Entry
106325090 CDS
T04124
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106325090
09123 Folding, sorting and degradation
03018 RNA degradation
106325090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106325090
03041 Spliceosome [BR:
boe03041
]
106325090
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106325090
mRNA degradation factors
5'-3' decay
Lsm complex
106325090
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106325090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
106325090
NCBI-ProteinID:
XP_013618569
UniProt:
A0A0D3AVS4
LinkDB
All DBs
Position
C2:44014373..44015806
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDAAVESVRDHDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaaaggaaacggtgttggatttggctaagtttgtggataagggcgtgcaa
gttaagcttactggtggtcgacaagtcactggaactcttaaaggctacgatcagttgctg
aaccttgttctagatgcggcggtggagtctgttcgagatcatgatgatccgttgaagact
actgaccagaccagacgccttggtttaattgtttgtcgcggaactgcggtgatgctcgtc
tcaccaactgatggaactgaagaaattgctaacccgttcgttcaacctgaagctgtctaa
DBGET
integrated database retrieval system