Brassica oleracea (wild cabbage): 106325145
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Entry
106325145 CDS
T04124
Name
(RefSeq) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106325145
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
106325145
Ribosome biogenesis [BR:
boe03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
106325145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_25
GCD14
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
106325145
NCBI-ProteinID:
XP_013618623
UniProt:
A0A0D3AE18
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Position
C1
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AA seq
520 aa
AA seq
DB search
MAQLLSFRVYLSAETQKASPESFKRTQKTRKPFTPGQRGPVRKPQNLNLEVSPHRAVSAV
RLMRIEFGGAFADLLNEKGKGSGSNEMSYVERTIGFRTRDLDDRDLRLVTDVVGGTIRWR
RYLDHLIGSLCHNERTFRNMEPLLLQILRIGFYEIIKLDMPAYAVVDENVRLAKIALRPG
AGDLVNGILRKLVSLKEKDALPLPKVEGDDRAQARALATLHSHPVWMVRRWVKYLGLDEA
TKLMTWNNTDPGFSLRANMGRGITRADLVERLNSLKVPHELSLHLEDFVRIKTGLQMVVQ
AGLLKEGICSVQDESAGLVVSVVKPQPGDRILDACAAPGGKTLFMASCLKRQGMIYAMDV
NEGRLRILGETAKSHQVNGLITTIHSDLRVFAETKEVQYDKVLLDAPCSGLGVLSKRADL
RWNRKLEDMEELTNLQDELLDSASKLVKPGGFLIYSTCSIDPEENQGRVEAFLLRHPEFS
VDPVDRLVPSSFVTLQGFFLSNPVKHYLDGAFAARLVRAL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattgctctcgtttcgcgtctatctctctgccgaaacgcagaaagcttctcca
gagtcgtttaagcgaacccaaaagactcgcaaaccgttcacgcctggtcagagaggtcca
gtgaggaaacctcagaatctgaatttggaggtttctccacatagagctgtatctgcggtc
agattgatgagaattgagttcggtggtgcgtttgctgatcttttgaatgagaaaggcaaa
gggtctgggagcaatgagatgagttatgttgaaagaaccatcggttttcgaacacgcgat
ttggatgaccgggatcttagactggttactgatgttgttggaggaacaatacgttggaga
aggtaccttgatcacttgattggttccctttgccacaacgaaaggacgtttcgaaacatg
gagcctcttctgttgcagattctccgcattggtttctatgagatcattaagcttgatatg
ccagcatacgctgttgtagatgagaacgtaaggcttgcaaagattgcgcttagacctggt
gctggagatcttgtcaatgggattcttcgtaagcttgtctctcttaaggaaaaagacgca
cttcctttacccaaagtggaaggggatgatcgtgcacaagcacgtgcacttgctacactt
cattcacaccccgtttggatggttaggcgatgggtgaagtatcttgggttggatgaagcc
actaagctgatgacgtggaacaacactgatcctggattcagcttaagggccaatatggga
aggggcattacaagagcagaccttgtggagcgtctgaactctttaaaggttccacacgaa
ctgtccttacacttggaggactttgtccgcatcaaaacaggattgcagatggttgtgcaa
gctggtttactcaaagaaggcatatgctctgtccaggatgagagtgcaggactagtagtc
tcagtggtgaaacctcagccgggagataggatactggacgcatgtgctgctcctggaggg
aagacccttttcatggcgtcttgcttgaaacgccaaggtatgatatatgctatggatgtg
aatgaaggacggctcagaattcttggggagacggcaaaatcacaccaagttaatggactt
atcacaaccattcattcagatctccgtgtcttcgctgaaaccaaagaggtacaatatgat
aaagtgttgcttgacgccccttgttctggactcggtgtcctctccaagagagcggatttg
cgctggaaccgtaaactagaagacatggaagaacttacgaatctgcaggatgagcttctt
gattctgcctccaaactggtgaagccaggtgggttcttgatatacagtacttgctcgatc
gaccccgaagaaaatcaaggaagggtcgaagcgtttctcctaagacatcctgagttctcg
gtagatccagtagacagattagtaccatcaagttttgtaactctgcaaggcttcttttta
tccaacccagtgaaacactacttggatggagcgtttgcagctcgtctggttagagcctta
tga
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