Brassica oleracea (wild cabbage): 106325681
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Entry
106325681 CDS
T04124
Name
(RefSeq) 26S protease regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
106325681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
boe03051
]
106325681
Proteasome [BR:
boe03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
106325681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_22
TIP49
RuvB_N
AAA_2
PRS7_OB
DUF815
RNA_helicase
nSTAND3
AAA_7
AAA_24
Mg_chelatase
AAA_14
Parvo_NS1
PIF1
AAA_18
NPHP3_N
Sigma54_activat
TsaE
AAA_28
NB-ARC
Sigma54_activ_2
IstB_IS21
ABC_tran
ResIII
AAA_17
AAA_3
NACHT
AAA_11
Motif
Other DBs
NCBI-GeneID:
106325681
NCBI-ProteinID:
XP_013619197
LinkDB
All DBs
Position
C2:23414289..23416084
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AA seq
398 aa
AA seq
DB search
MEDGEEEISSRLVAIFTYTCVFNTRNSWQEETKTDKAYLEDLKIALEETEDELNYFTTTH
AELVGEVVQPLGKERFLVKVNEGVRLIVNRSSLVDQSKLVSGTRVTLERRTFTIMRILPP
EVNPLVHKMVCQHDGGDVSYSDLGGLTHQLRDVRDWIERPLIDPDIFERVGVKPPKGVLL
YGPPGTGKTLLAKAISSNINSTFLMVVSSSLVSKYVGESPLMVREMFKYAREHQPCIIFL
DEIDAIGRRRSSYGEGDTRECDRVLIELLSQLDGFNELDKVKVIMATNRPDVLDPALLRP
GRIDKKIEFSLPNEDSRMRILKIHASGITKQGDIDYEKVVKLSEGFNGADMRNVCTEAGM
LALRAGHDYVVPSDFIKAETKLGEAKKLESSAQYNADF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggagaagaagagatatcgagtagactcgtagccatttttacgtacacgtgt
gttttcaacactcgcaacagctggcaagaagaaaccaaaactgacaaagcgtatttggaa
gatttaaagatagcgctcgaagaaactgaagacgaactcaactactttaccactactcat
gcggaattggttggagaagttgtgcaacctcttggcaaagaaagatttcttgtgaaagta
aacgaaggagttcgtctcatagtgaatcgctcaagcttagtggatcagtcgaagcttgtt
tctggaaccagagttactcttgagagaagaacgtttactataatgagaatcctccctcca
gaggttaatccattggttcataagatggtgtgtcaacatgatggtggtgatgttagttac
tcagatcttggtgggttaactcatcagctcagagatgtaagagactggattgaacgtcct
ctcatagatcctgacatttttgaacgagttggtgtaaagcctcccaagggagtgcttctc
tatggacctcctggtactggaaagacattgttagccaaagcaatctctagcaatatcaat
tcaactttcttgatggttgtttctagctcgcttgttagcaaatacgtgggagagagtcca
ttgatggtgagagagatgtttaaatatgcccgtgaacatcaaccttgcatcatctttttg
gatgagattgatgctattggtagacgtagatccagctacggagaaggagatactagagag
tgtgacagagtcctcatcgagcttctctctcaacttgatggattcaacgaacttgataag
gtgaaggttataatggcaacgaacagacctgatgttcttgaccctgcgcttcttcgacct
ggtagaatcgataagaagatagagttctcattgcctaacgaagattccagaatgagaatc
cttaagattcatgcttctggtattactaaacaaggagatatcgactacgaaaaggtcgtg
aaactatctgagggattcaatggagcagatatgcgtaacgtatgtactgaagcagggatg
ttagctttacgtgcagggcacgattacgttgtccccagcgacttcatcaaggctgaaacg
aaactaggcgaagcgaagaagcttgagtctagtgcacaatacaatgctgatttctga
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