KEGG   Brassica oleracea (wild cabbage): 106326250
Entry
106326250         CDS       T04124                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA3-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106326250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106326250
Enzymes [BR:boe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106326250
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106326250
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 zf-RING_5 Prok-RING_4 zf-rbx1 A24_N_bact Bac_export_2 zf-ANAPC11
Other DBs
NCBI-GeneID: 106326250
NCBI-ProteinID: XP_013619733
UniProt: A0A0D3A6Y9
LinkDB
Position
C1:14021418..14022945
AA seq 236 aa
MELEGNFFMSDAQQAHDDAFLAKQKPNLVTGPIGGQNANESGCFDCNICLDTAHDPVVTL
CGHLFCWPCIYRWLHVQLSSVSIDQHHNNCPVCKSNIAVTSLVPLYGRGMSSGFGSKKLD
AVIPRRPAPPITSGSSLNPRLQHHRTMSPTFHSRNQYSPRGFTTTESTDLANAVMMSFLY
PVIGMFGDLVYTRIFGTFTNAIAQPYQSQRMMQREKSLNRVSIFCFFCIFLCLLLF
NT seq 711 nt   +upstreamnt  +downstreamnt
atggaattagaagggaacttcttcatgtctgatgctcaacaagcacatgacgatgccttc
ttagctaaacaaaaacctaatctcgtcacgggtcccattggaggtcaaaacgctaacgaa
agtggctgttttgattgcaacatctgcctagacacagcccatgatccggttgtcactcta
tgcggacaccttttctgctggccttgcatatacagatggttacacgttcagttatcatcc
gtctcaatcgatcagcaccacaacaactgccctgtttgcaaatccaacatcgccgtcacc
tcactggttcctctctacggaagaggcatgtcttccgggtttggctcgaagaaactagac
gcagtaataccacggagacctgctccaccaatcacttcaggatcatctctgaacccaagg
ttgcaacatcatcgaacaatgtctccaacgtttcacagccgcaaccaatactcccctcgt
ggcttcacaacaacggaatcaacagaccttgcgaatgcagtcatgatgagtttcctctac
ccggtgattgggatgtttggggacttggtctacaccaggatattcggaaccttcacaaac
gcaatagctcagccttaccaaagccagaggatgatgcagcgtgagaagtctcttaaccgg
gtatccatattctgcttcttctgcatcttcctttgcctccttctcttctag

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