KEGG   Brassica oleracea (wild cabbage): 106326525
Entry
106326525         CDS       T04124                                 
Name
(RefSeq) VAMP-like protein YKT61
  KO
K08516  synaptobrevin homolog YKT6
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    106326525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106326525
Membrane trafficking [BR:boe04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    106326525
SSDB
Motif
Pfam: Longin Synaptobrevin DUF6891 TscT PMI_typeI_hel
Other DBs
NCBI-GeneID: 106326525
NCBI-ProteinID: XP_013619945
UniProt: A0A0D3ALA0
LinkDB
Position
C2:complement(8609191..8610423)
AA seq 199 aa
MSITALLVLKCTPDTPNPVILAHAFDFSGFNYFYHPNISEFVRFFGSTVAGRTLPSQRQS
VKHKDEVVHSYNRNGLCAVGFMDDRYPVRSAFSLLDQVLDEYQKIFGETWRSAKEVSKQK
WPYLVEALEKFKDPAEADKLLKIQMKLDESSIIFHKTIDGLLARGEKLDSLVEKSSDLNK
ASKMFYKRARKTNTCCTIL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgagtatcacggccttgcttgttctcaagtgcactcccgatactccaaacccagttatc
ctcgctcacgcattcgacttctctggattcaactatttctaccaccctaacatctcagag
ttcgttcgcttcttcggtagtactgtcgctggccgaacccttccttctcagcgccaatct
gttaaacacaaagacgaagtagtgcattcttacaacagaaacggcctatgcgccgtggga
ttcatggacgaccgttatcctgttcgaagtgctttttctcttctcgatcaggttcttgat
gagtaccaaaagatatttggtgagacatggaggtcagcaaaagaagtctctaagcagaag
tggccatacttagtagaagctttagaaaaatttaaggacccggctgaagctgataagctg
ttgaaaatacagatgaagctggatgagagcagtattatatttcataaaaccattgatggt
ctcctagcccgaggtgaaaagctggacagtttagtggagaagagttcagatttaaacaag
gcatcaaagatgttttacaagcgagcgaggaaaacaaacacatgctgtacaattctctga

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