Brassica oleracea (wild cabbage): 106326525
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Entry
106326525 CDS
T04124
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106326525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106326525
Membrane trafficking [BR:
boe04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
106326525
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Motif
Pfam:
Longin
Synaptobrevin
DUF6891
TscT
PMI_typeI_hel
Motif
Other DBs
NCBI-GeneID:
106326525
NCBI-ProteinID:
XP_013619945
UniProt:
A0A0D3ALA0
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Position
C2:complement(8609191..8610423)
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AA seq
199 aa
AA seq
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MSITALLVLKCTPDTPNPVILAHAFDFSGFNYFYHPNISEFVRFFGSTVAGRTLPSQRQS
VKHKDEVVHSYNRNGLCAVGFMDDRYPVRSAFSLLDQVLDEYQKIFGETWRSAKEVSKQK
WPYLVEALEKFKDPAEADKLLKIQMKLDESSIIFHKTIDGLLARGEKLDSLVEKSSDLNK
ASKMFYKRARKTNTCCTIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcacggccttgcttgttctcaagtgcactcccgatactccaaacccagttatc
ctcgctcacgcattcgacttctctggattcaactatttctaccaccctaacatctcagag
ttcgttcgcttcttcggtagtactgtcgctggccgaacccttccttctcagcgccaatct
gttaaacacaaagacgaagtagtgcattcttacaacagaaacggcctatgcgccgtggga
ttcatggacgaccgttatcctgttcgaagtgctttttctcttctcgatcaggttcttgat
gagtaccaaaagatatttggtgagacatggaggtcagcaaaagaagtctctaagcagaag
tggccatacttagtagaagctttagaaaaatttaaggacccggctgaagctgataagctg
ttgaaaatacagatgaagctggatgagagcagtattatatttcataaaaccattgatggt
ctcctagcccgaggtgaaaagctggacagtttagtggagaagagttcagatttaaacaag
gcatcaaagatgttttacaagcgagcgaggaaaacaaacacatgctgtacaattctctga
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