Brassica oleracea (wild cabbage): 106326537
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Entry
106326537 CDS
T04124
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 19
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106326537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106326537
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106326537
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
106326537
NCBI-ProteinID:
XP_013619950
UniProt:
A0A0D3ACT1
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Position
C1:complement(35957491..35965177)
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AA seq
743 aa
AA seq
DB search
MISPNENDQVSIPEATSRAHTGAFNFKNRSVSLSNSTYYIDGCDKSKVALGYTVPIRTQR
RPPGPLYSTLRPESLLPPSIEPPDSSSTVDVRSEDESVVKNANILTSGQLGMCNEPYCTT
CPSYYSHQSANFHTSKVSDSRFHTALYDDARGWAKRFASSVRRCVPGIMNPHSKFVQVWT
RFLAFSCLMAIFIDPTFVFLLLIRHDNKCIEIDWTKTTVLVSLRSMFDLIFFINILLQFR
MAYVAPESRIVGAGQLVDHPRKIARNYLRGKFFLDLFIVLPIPQIMTLSILPAHLGTSTA
GFERNITRSIFIVQYIPKLYRLLPLLAGQTPTGFIFESAWASFVINLLTFMLAGHAVGSC
WYFSGIERVKKCLLYAAWNNSVDERRNLIDCARGNMYASASLRALWRDSDSVNACFQESG
FSYGIYAKAVNLTSHSSIFTRFSYSLFWGFQQISTLAGNLSPSYSVGEVFFTMGITGLGL
LLFARLIGNMHNFLQALDRRRMEMMLRRRDVEQWMSHRLLPEDIRKRVREAERFNWAATR
GVNEELLFENMPEDLRRDIKRHLFKFLKKVRIFSLMDESILDSIRERLKQRTYISSSTVL
HRRGLVEKMVFIVRGGMESIGQDGSVLLLSEGDVFGEELLTWCLERSSVNPDGRSIKLPL
KGLVSNRSVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVLGAIRYESPYWRLRAATQI
QVAWRYRRRRLHRLYTAQSTSRR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatttccccaaacgaaaacgaccaagtttccattccagaagcaacatctcgtgctcac
accggggctttcaatttcaagaaccgtagcgtttccctctcaaattcaacttattacatt
gatggatgtgacaagtcaaaggtggctttgggctacacagtcccaattcgaacacagaga
agaccacctggtcctctttactctactctcagacctgagtctctccttcctccatctatt
gaacctcctgattcctcctctaccgttgatgttcgatctgaagacgaatccgtcgtgaaa
aatgcaaatatcttgacatctggacaactagggatgtgtaatgaaccttactgtaccact
tgtccttcttactacagccaccaatctgctaattttcatacttccaaagtttctgactcc
aggttccacactgctctgtatgatgatgctagaggttgggctaagcgatttgcttcctct
gttcgtagatgcgtgcctggaatcatgaatcctcattccaaattcgttcaagtctggact
agattcttagccttttcatgcttgatggctatttttatagatcccaccttcgtcttcctc
ttattaatccgacatgacaacaaatgtatagagattgattggacaaagactaccgtactg
gtgtctcttaggagtatgtttgatcttattttctttattaacattctgcttcagtttcga
atggcctatgtagctcctgagtctagaatagttggtgctggccagttagttgatcatcca
agaaaaattgctcgtaattacttgcgaggcaaattttttcttgatttgttcatagtgtta
cccattccacagataatgacattatcgatattaccagcacacttaggcacatccacagca
ggatttgagagaaacattacacgcagcatatttatagtacaatacattccaaagttatat
aggcttcttcctcttcttgctggccaaacaccgacaggcttcatatttgagtcggcttgg
gccagctttgttattaatcttctaaccttcatgcttgctggtcatgctgttggatcttgc
tggtatttttcaggaattgagagagtaaaaaagtgtctgttgtatgcggcttggaataac
tcggtagatgaacgtaggaaccttatagattgtgctcgtgggaacatgtacgcatctgcg
tcactacgagctctctggagagatagtgacagtgtcaatgcttgttttcaagagagtggc
ttttcgtatggcatctatgcgaaggcagtcaatcttactagtcattctagtatcttcaca
cgattcagttactctctgttttggggattccagcaaataagcacgcttgctggaaaccta
tcaccaagttactcagtgggggaggttttctttacaatgggcatcactggactaggcctt
ttgctttttgcgaggctcattggtaatatgcacaacttccttcaagctcttgatcgaagg
aggatggaaatgatgcttagacggcgtgacgtggagcagtggatgagccatagactgttg
ccagaagatataagaaagagggtgcgagaggcagagcggttcaactgggcagcgactaga
ggagttaacgaggaattgctctttgagaatatgcctgaagacctccggagagatataaaa
cgtcatctcttcaaatttctcaagaaggtgagaatattctcgctgatggatgaatcaatc
ttggattcaatacgtgagaggctgaaacagaggacgtacataagtagtagcacggtgttg
caccgcagaggtctagttgaaaaaatggtattcatagtgagaggtgggatggagagcatt
ggacaagacggttctgttcttcttttatcagaaggtgatgtttttggtgaagagcttctc
acttggtgcctcgaacgctcttctgtaaacccggatgggaggagcataaagttgcctcta
aaggggttggttagcaacagaagtgttagatgcgtgacaaacgtagaggcgttttcgctg
agtgtagcagatcttgaagacgtaacgagcttgttctcaagattcctacggagccatcga
gtgctaggggccataagatacgagtctccgtattggaggctaagagcagctacgcaaata
caagtggcttggagatacagaaggagacgacttcacagattatacactgctcagtcaact
tcccgccgatag
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