Brassica oleracea (wild cabbage): 106326694
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Entry
106326694 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106326694
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106326694
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106326694
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106326694
NCBI-ProteinID:
XP_013620060
UniProt:
A0A0D3ALC2
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Position
C2:complement(8713367..8716832)
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AA seq
721 aa
AA seq
DB search
MAGKPQTFVSVDDLDFKLPSSSSLTRQHNYSSSISGPLHPIQGSHNASGSFKKRFQKGSK
GLKSIGRSLGFGVYRAVFPEDLKVSEKKIFDPQDKTLLFCNKLFVVSCILSVFVDPFFFY
LPVINGESKCLGIDRKLAITATTFRTFIDVFYLAHMALQLRTAYIAPSSRVFGRGELVID
PAQIAKRYLQRWFIIDFLSVLPVPQIVVWRFLQRSRGSDVLATKQALLFIVLVQYIPRFL
RVLPLTSELKRTAGVFAETAWAGAAYYLMLYMLASHIVGAFWYLLALERNDACWQEACSD
AGKKICTTGFLYCGNQNMDGYDVWNKTKESVLQSKCRAELDDPNPPFDFGIYTQALSSGI
VSSQKFITKYCYCLWWGLQNLSTLGQGLETSTYPLEIMFSITLAISGLILFALLIGNMQT
YLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRQRVRRYDQYKWLETRGVDEEYLVQNLP
KDLRRDIKRHLCLALVRRVPLFESMDEKLLDAICMRLKPCLFTESTYLVREGDPVDEMLF
IIRGRLESVTTDGGRSGFFNYSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEV
EAFALASEELKFVASQFRRLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEA
EAEAVPMSTTGSSSSMGAAFLVTKFAASALRTIHRNRNTRIRELVKLQKPPEPDFTAEDA
D
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaaaccacaaacttttgtgagcgtggatgatctggactttaagctaccatca
tcatcatctctaacccgccaacacaactactcctcaagtatcagtggaccacttcacccc
attcaaggaagccacaacgcatctggatccttcaagaaacgtttccaaaaaggttccaag
gggctcaaatccataggtcgttcgcttggtttcggtgtttacagagctgtcttccctgaa
gacctcaaagtatctgagaagaagatatttgatcctcaggacaaaaccctcttgttctgc
aataagctgtttgttgtctcgtgtattctctcggtgttcgtggaccctttcttcttctac
cttcctgtgatcaatggtgagtccaagtgcctcggtattgaccggaagctggctatcacg
gcgactacgtttaggactttcatcgacgtgttttatctcgctcacatggctctccagctc
aggactgcttatattgcaccctcgtctagggtctttgggagaggtgagcttgtgatagat
cctgcgcagatagcaaagagatatttgcagcggtggtttatcattgatttcctctctgta
cttcctgtccctcagattgtagtgtggaggttcttgcaaaggtcaaggggatcagatgta
ttggctacaaagcaggccttgcttttcattgttttggttcagtatataccgcggtttctt
cgtgtcttgcccttgacatctgaactgaaaaggacagcaggtgtctttgcagaaactgct
tgggctggtgctgcttattatctgatgttatatatgcttgcaagtcatatagttggagcg
ttttggtaccttttagcgttagaacgcaatgacgcatgttggcaggaggcttgtagtgac
gcagggaagaaaatttgcacaacaggtttcttgtactgtgggaatcaaaacatggacggc
tatgatgtttggaacaagaccaaagaatctgttcttcagtccaagtgccgcgctgagtta
gatgatcctaatcctccatttgactttgggatttatacacaggctttatcctctggcatt
gtctcttctcaaaagtttatcacaaagtattgttattgcttgtggtggggccttcagaac
ttgagtacactaggacaagggcttgaaaccagtacatacccattggagattatgttctcc
atcactctggccatctccgggttgattctctttgctctcctcatcggaaacatgcagaca
tacctccaatctcttaccatccggctggaagaaatgagagtgaagaggcgtgattcagag
caatggatgcatcacaggatgttaccacaagatcttaggcagcgtgtgagacgctatgac
cagtataaatggctggagacacgtggcgtagatgaagagtatctcgttcagaatctcccc
aaggatctccggagagacatcaagcgccatctttgtctggctttagtgcgcagggttcca
ttgtttgagagcatggacgagaagctgctggatgcgatctgcatgcggctgaagccatgt
ttgttcacagagagcacctacttagtccgagaaggagaccctgtagacgagatgctattc
atcatacgtggccgcctcgagagtgtgacaacagatggaggcaggagcggtttcttcaac
tacagtctcctcaaagaaggagagttctgcggtgaagagcttctgacatgggcgttggat
ccaaaatcaggtgtgaacctcccgtcctccacaagaaccgtgaaagctctgacagaagta
gaggcctttgcgctggcctcagaggagctgaagtttgtagcaagccagttcaggcgtctg
catagcaggcaagtgcagcacacgttcaggttttactctcaccaatggaggacttgggct
gcttgctttatccaagctgcgtggcggagatactgcaagaggaagaagatggaagaggca
gaggcagaggccgtgcccatgtcaaccactggaagttcatcctccatgggggctgcgttt
cttgtcacgaagtttgcggctagtgcgctgcgcaccatacacaggaacaggaacacacgg
attagggaattggtaaagctgcagaagcctcctgagcctgatttcactgcggaagatgct
gattaa
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