Brassica oleracea (wild cabbage): 106326892
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Entry
106326892 CDS
T04124
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106326892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106326892
04121 Ubiquitin system [BR:
boe04121
]
106326892
03029 Mitochondrial biogenesis [BR:
boe03029
]
106326892
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106326892
Atg8 conjugation proteins
106326892
Ubiquitin system [BR:
boe04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
106326892
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106326892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
106326892
NCBI-ProteinID:
XP_013620300
UniProt:
A0A0D3AUE6
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All DBs
Position
C2:39668497..39671955
Genome browser
AA seq
696 aa
AA seq
DB search
MDERESPPTMILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYAPCSHPQVSN
HLTLLSESLPSSSDEQSPTESTILGNRNKCPVPGTLYNTNTVESFTKLDKQSLLKAEANK
IWEDIQSGKALEDCALLSRFLVISFADLKKWSFRYWFAFPALVLDPPASLVELKPASEYF
TSEDAESVSAACNEWRDSSLTTDVPFFLVSVSSDDSKATIRHLKDWEACQGDHHKLLFGF
YDPCHLPSNPGWPLRNYLALIRSKWNLETVWFFCYRESRGFADMSLSLVGQASITLSSDS
SVPNSVGWELNKGKRAPRSISLANSMDPTRLAVSACDLNLKLMRWRALPSLDLNVLSSVK
CLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYTFEDCVGRGEFKAVAA
VKSLKQIFPAVESSGVVMAIPMPGHPISSQEEESVLGDCKRLRDLIESHDAVFLLTDTRE
SRWLPSLLCANANKIAINAALGFDSYMVMRHGAGPNSLSDDMQNLDINKTGRQRLGCYFC
NDVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGIYAKGDNSSSSNG
GNSDESPLGILPHQIRGSVSQFSQITLLGQASNSCTACSETVVSEYREKGNSFILEAINH
PTYLEDLTGLTELKKAANSFSLDWEDDGDDDEAVDM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagagaatctccaccgacgatgatacttcaattcgctccattgaacagctcc
gtcgacgaaggtttctggcacagcttttcctctttgaaactcgataagctcggaatcgac
gattctccgatctccatcaccggtttctatgcaccgtgttctcatccacaagtctcaaac
catctgactcttctttcggagtcattgccttcttcttcagatgaacagtcaccgaccgag
agtactattcttgggaataggaacaagtgtcctgttccagggactctctacaacaccaac
accgtcgaaagctttactaaactcgacaaacaaagcttgttaaaagcagaagcaaacaag
atttgggaagatattcaatcgggaaaggctctcgaggactgtgctttgttatctagattc
ctcgttatctcgttcgctgaccttaagaagtggagtttccgttattggtttgcgttccct
gcacttgtgcttgatcctcctgcaagcttggttgagttaaagccagcttcggagtatttt
acttcagaagatgcagaatcagtatctgctgcgtgtaatgagtggcgtgactcaagttta
acaactgatgttccattctttttggtttcggtttcttctgatgattcaaaagctaccatc
agacatcttaaagactgggaagcctgccaaggtgatcatcataagttgcttttcggtttc
tatgacccgtgtcaccttcctagtaaccctggctggccacttcggaattatctagcactt
attcgctcaaagtggaacctcgagactgtttggttcttctgctacagagagagccgcggt
ttcgctgacatgagcctttctcttgttggtcaagcctccattacactctcatctgattca
tctgtacctaactcagtgggatgggagcttaacaaaggaaaacgagctcccagatccatc
agccttgctaactccatggatccaaccaggttggctgtttctgcttgtgatttaaacttg
aagttaatgagatggcgtgcgttaccgtctctagacttaaacgttctgtcctctgtcaaa
tgccttcttcttggagctggtacattgggttgccaagttgctcgtactcttatgggttgg
gggatccgcaacataacctttgttgactacggcaaagtagctatgtctaatccagtcaga
caatctctctacacgtttgaagactgtgttggtcgtggcgagttcaaagccgttgctgct
gttaaaagccttaaacagatctttccagcagtggaatctagtggagttgttatggctata
ccgatgcctggacatcccatctctagccaagaagaagaatctgttctcggtgattgcaaa
cgccttcgtgatttgattgagtctcatgatgcagtgttcttgttgactgatacaagagaa
agcaggtggctaccttctcttctttgtgctaacgctaataagattgctataaacgcggct
ttgggtttcgacagctacatggtaatgcgccatggtgctggccccaactcgttgtctgat
gatatgcagaatcttgatattaacaagacaggaagacagagacttggttgttatttctgt
aacgacgttgttgcacctcaagattcaatgactgatcggacactggaccagcaatgcact
gttacacgcccagggctagctcctattgcaggagctttagccgttgaactcttagtcgga
gttctacaacacccacttggtatctatgcaaaaggagacaactcgagttcgagtaatgga
ggaaactccgatgaatcacctctcgggatcttacctcatcagattagaggatcagtttct
cagttctcacagatcacactgctcggacaagcctccaacagctgcacagcttgttctgaa
actgtggtgtcagagtatagagaaaaaggaaacagtttcatacttgaagctattaaccat
cctacatacctggaggatcttaccggtttaaccgagcttaagaaagctgctaattcgttt
agcctcgattgggaagacgatggtgatgacgatgaagctgtagatatgtaa
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integrated database retrieval system
