Brassica oleracea (wild cabbage): 106327015 Help Entry 106327015         CDS       T04124                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism boe  Brassica oleracea (wild cabbage) Pathway boe03040   Spliceosome Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     106327015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:boe03019]     106327015    03041 Spliceosome [BR:boe03041]     106327015 Messenger RNA biogenesis [BR:boe03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      106327015 Spliceosome [BR:boe03041]  Complex B   Other components    Prp19-related factors     106327015  Complex C     106327015 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 TPR_15 Mad3_BUB1_I Motif Other DBs NCBI-GeneID:  106327015 NCBI-ProteinID:  XP_013620467 UniProt:  A0A0D3AX47 LinkDB All DBs Position C2:complement(47948358..47951922) Genome browser AA seq 916 aa AA seqDB search MAISQDLYPSQEDLVYEEEILRNPFSLKLWWRYLISKSDSPFKKRFVIYERALKALPGSY KLWHAYLRERLEIVRNLPVTHPHYDSLNNTFERGLVTMHKMPRIWVMYLQTLTAQKLVTR TRRTFDRALCALPVTQHERIWEPYLVFVGQEGVPIETSLRVYRRYLMYDPSHIEEFIEFL LKSARWQEAAERLAFVLNDDQFYSIKGKTKHKLWMELCELLVCHANEISGLNVDAIIRGG IRKFTDEVGMLWTSLADYYIRKNLLEKARDVYEEGMMKVVTVRDFSVIFDVYSRFEESTV AKKMEMMSSSDEEEDEAEEEDEEEDVRLNFSLSVKELQRKILNGFWLNDDNDVDLRLARL EELMNRRPALANSVLLRQNPHNVEQWHRRVKIFEGDAAKQILTYTEAVRTVDPMKALGKP HTLWVAFAKLYEDHKDLVNTRVILDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGALE LMRRATAVPTVEVKRRVAADGNEPVQMKLHRSLRLWSFYVDLEESLGTLESTRAVYEKIL DLRIATPQIILNYAYLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLTKFVKRYGKA KLERARELFEHAVSMAPSDAVRTLYLQYAKLEEDYGLAKRAMKVYEEATKKVPEGQRLEM YEIYISRAAEIFGVPRTREIYEQAIESGLPHKDVKIMCIKFAELERSLGEIDRSRAVYKY ASQYADPRSDPEFWNKWHEFEVLHGNEDTYREMLRIKRSVSASYSQTHFILPENMMQKDK IDVEEAKDELKKAGLPEDEMAALERQLMAAPMSTTVTSKDGGRRVGFVSAGVILQSGENA GKPVTGNGEDIELPDESDEDESDGDDNVEIAQKEVPAAVFGGLARKREEDGKEAEEDGAG KTLGALERIKRQKLGQ NT seq 2751 nt NT seq  +upstreamnt  +downstreamnt atggctatctcccaagatctctacccttcccaagaagacctcgtctacgaggaagagatc ctccgaaaccccttcagcctcaagctctggtggcgctacctcatctccaaatccgactcc cctttcaagaaacgcttcgtcatctacgagagagccctcaaggccctccctggaagctac aagctctggcacgcctacctccgcgagaggctcgagatcgttcgtaacctccccgtgact caccctcactacgactccctcaacaacactttcgagagagggctcgtgactatgcacaag atgcctaggatctgggttatgtatctccagacgcttacagctcagaagctcgtgactagg acgaggaggacgtttgatcgtgctctctgtgccttgcctgtgactcagcacgagaggatc tgggagccgtatctcgtctttgtggggcaggagggtgttcccattgagacctcgcttaga gtttacaggaggtatcttatgtatgatccttctcatattgaggagtttattgagtttctg ttgaagtctgctcgttggcaagaggctgcggagaggttggcttttgttttgaatgatgat cagttttattctattaaagggaagactaagcataagctgtggatggagctttgtgagctt cttgtgtgtcatgctaatgagatctcggggttgaatgtggatgctattattagaggaggg attaggaagtttaccgacgaggttgggatgctgtggacgtctcttgcggattattacatt aggaagaatctgcttgagaaggctagggatgtttatgaggaagggatgatgaaggttgtg actgtgagggactttagtgttatattcgatgtgtattcgaggtttgaggagagtactgtt gccaagaagatggagatgatgagttcgagtgatgaggaagaagatgaggctgaagaggag gatgaggaggaggatgtccggcttaacttttctctgtctgtaaaggagctgcagaggaag atactgaatgggttttggcttaacgatgataacgatgttgatctgaggttggctcgcttg gaggagctgatgaacagaaggcctgcgttagccaacagtgtcctccttaggcagaaccca cacaacgttgagcagtggcatcggagagttaagatcttcgagggagacgcagcgaagcag attctcacttacacagaagcagtgaggactgttgatcctatgaaggcccttgggaagcct cacacgttgtgggttgcgtttgctaaattgtatgaagaccacaaagacttggtcaacact agagtgattctggacaaggcggttcaagtgaactacaagacggtcgaccatctcgccagc gtctggtgcgagtgggctgagatggagctgaggcacaagaatttcaaaggagcgttagag ctgatgaggcgtgctacggctgtaccaacggtggaagtcaaaaggagagtggctgctgat gggaacgagccggttcagatgaagctgcacagatccttgaggctttggtccttttacgtt gatttggaggagagccttgggacgctggagtcgacgagagcagtctatgagaagatattg gatttgaggatagctactcctcagatcattctgaactatgcttaccttcttgaggagaat aagtactttgaagatgctttcaaggtgtatgagagaggtgtcaagatattcaagtatcct catgtgaaagacatatgggttacttatcttacgaagtttgtcaagagatatggaaaggca aagctggagcgggccagagagttgtttgagcatgctgtttcaatggctccatcagatgct gtcaggaccttataccttcagtacgccaagctagaagaggattacggtctagccaagcga gccatgaaagtttacgaagaagccaccaagaaggttccagaaggccagaggctggagatg tacgagatatacatttcccgtgcggcagagatcttcggtgttccaagaacgagagagata tacgagcaagcaatagaatctggacttccacacaaggatgtgaagatcatgtgcataaag ttcgcagagctggagagaagcttgggagagattgatcgttctcgtgctgtctacaagtac gcctctcagtacgctgatccgagatccgacccggagttctggaacaagtggcacgagttt gaggtgctccatgggaatgaagacacgtatagagagatgcttaggatcaagagaagcgtt tccgcaagttacagtcagactcatttcattctgccggagaacatgatgcaaaaggacaag atagacgtggaggaggcgaaagacgagctgaagaaagcgggtttgccagaagatgaaatg gcggctctggagaggcagctcatggcggcgccaatgtctaccacggttacatctaaggat ggtgggaggagagttgggtttgtgagcgcaggagtcatcttgcagtcaggtgagaatgcg gggaagcctgtgacagggaatggggaagatattgagcttcctgacgagagtgatgaagat gagtctgatggagatgacaatgtagagatcgctcagaaagaagtccctgctgctgtgttt ggaggacttgctagaaagagagaggaagatggtaaagaagctgaggaagacggtgcaggg aagactctgggtgcgttggagaggataaagagacagaagctaggtcagtga

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