Brassica oleracea (wild cabbage): 106327031
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Entry
106327031 CDS
T04124
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106327031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106327031
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106327031
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106327031
NCBI-ProteinID:
XP_013620483
LinkDB
All DBs
Position
C2:12662682..12665885
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AA seq
711 aa
AA seq
DB search
MNFRQEKFVRFQDWTSDKTSDVEYSGRNEPPNGIFRRTISSISDKFHRSSARIKTFRRTY
KSYSFKEAVSKGIDSTHKILDPQGPFLQRWNKIFVLACIVAVSLDPLFFYVPVVDDAKKC
LGLDNKMEITASVLRSFTDVFYVIHIIFQFRTGFIAPSSRVFGRGVLVEDTRQIAMRYLS
SHFIIDILAVLPLPQVVILIIIPHMRGSRSLNTKNLLKFIVFFQYIPRFIRIYPLYKEVT
RTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACNRNRNICDITSL
YCDHKAAGGNAFLNASCPVQTPNTTLFDFGIFLNALQSGVVESQDFPQKFFYCFWWGLQN
LSSLGQNLKTSTYIWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAE
QWMAHRLLPESLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVP
MFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFN
SEHLGAGDFCGEELLTWALDPHTSSNLPISTRTVRALVEVEAFALKADDLKFVASQFRRL
HSKQLRHTFRFYSQQWRTWAACFIQAAWRRHVKKKLEESLKEEENRLQDALAKEACGSSP
SLGATMYASRFAANILRTIRRSGSVRKPRMPERMLLQKPAEPDFNSDDYCI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccgacaggagaagtttgtgaggtttcaggactggacgtccgacaagacctcc
gacgtcgaatactccgggagaaacgagccaccaaacggaatcttccggagaacgataagc
tcaatctccgacaagttccacagaagctcggcgaggatcaaaacgttcaggagaacatac
aagtcctactctttcaaagaagccgtatccaaagggatcgattcgactcacaagatcctc
gacccgcagggaccgttccttcagagatggaacaagatcttcgttttggcttgcatcgtc
gccgtttctctcgaccctctcttcttctacgtccccgtggtcgacgacgccaagaagtgt
ctcggtcttgataacaagatggagataaccgctagcgtcttgcgctccttcactgatgtc
ttctacgtgattcacatcattttccagttccgtactggcttcatcgctccttcttctcgt
gttttcgggagaggtgttcttgttgaggacacgaggcagatcgctatgcgttacttgtct
tctcatttcattattgacattctcgctgttcttccacttccacaggtggtgattttgatt
attattccgcatatgagaggctcaaggtctttgaacacgaagaatctgttgaagttcatt
gttttcttccagtacataccgaggtttatcagaatctatccgctctacaaggaagttaca
agaacctcagggatactaaccgagacagcttgggcgggagctgctttcaatctcttcctc
tacatgcttgctagtcatgtgtttggtgctttttggtacttgttctctatcgagcgcgaa
accgtgtgttggaaacaagcgtgcaacagaaacaggaatatctgcgatatcacttcgctg
tattgtgaccataaagctgcaggaggcaatgctttcctcaatgcgtcttgtccggttcag
acgccaaacacaacgcttttcgactttgggatattccttaacgctcttcagtctggtgta
gtggaatctcaagatttccctcagaagttcttttactgcttctggtggggtcttcaaaac
ctcagttcgctcggtcaaaaccttaaaacaagtacgtacatatgggagatctgttttgct
gtcttcatttctatctcagggctggttttgttctccttcttgattggtaacatgcagacg
tatctgcaatcaacaaccacgaggttggaggagatgagagtcaagagaagagacgctgag
cagtggatggctcaccgtttgctccctgagagtctgagaaaaagaatcaggagatacgag
cagtacaagtggcaagagactagaggcgttgacgaagagaatcttcttagtaatctccct
aaagaccttagacgtgacatcaaacgccatctctgtctcgcccttctcatgagggtcccg
atgttcgagaaaatggacgagcagcttctcgatgctctatgcgaccgtttgcaaccagtg
ctgtacacagaggaaagctacatcgtaagagaaggagaccccgtagacgagatgctcttc
ataatgcgcgggaagcttctaacgatgacaacaaacggtggaagaacaggcttcttcaac
tcagagcacctcggagccggcgatttctgcggcgaggagcttctaacatgggccttagac
ccacacacatcctcaaacctcccaatctcaacgagaaccgttcgagctctagtggaggtc
gaagctttcgcgcttaaagctgatgacctcaagttcgttgcttctcagttcagacggctt
cacagcaaacagctgagacatactttcaggttctactcgcagcagtggaggacttgggcg
gcttgcttcatacaagccgcgtggagaagacacgtgaagaagaagctggaagagtctctt
aaagaggaagagaatcggttgcaggatgctttggctaaggaagcttgtggaagctccccg
agcctcggcgccaccatgtatgcgtcgcggtttgctgctaatatcttaaggactatacgc
aggagcgggtcggtaaggaagccgaggatgccggaacgaatgctgcttcagaaaccagca
gaaccagatttcaatagtgatgattactgtatatga
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