Brassica oleracea (wild cabbage): 106327049
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Entry
106327049 CDS
T04124
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
boe03110
]
106327049
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP100
106327049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
AAA_18
IstB_IS21
TniB
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
AAA_28
NACHT
AAA_25
AAA_24
ResIII
ABC_tran
NBD_SMAX1
Torsin
DUF848
Motif
Other DBs
NCBI-GeneID:
106327049
NCBI-ProteinID:
XP_013620510
UniProt:
A0A0D3AJ74
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All DBs
Position
C2:complement(3669958..3674277)
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AA seq
964 aa
AA seq
DB search
MATTATSAFSGVIGVGSESRKVSTFSHLQPSVAFPAKPNSFKSLKLKHSARLTRRLEHRP
FVVRCEASSNGRLTQQEFTEMAWQSIVSSPDVAKENKQQIVETEHLMKALLEQKNGLARR
IFSKIGVDNTKVLEATEKFIQRQPKVYGESAGSMLGRDLEGLFERARKYKKDLGDSYVSV
EHLVLAFAQDKRFGKQLFKDFQISEKSLKAAIESIRGKQSVIDQDPEGKYEALEKYGKDL
TAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLAQRIVQGDV
PQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGA
TNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTVS
ILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAKLKMEITSK
PTALDELDRAVIKLEMERLSLTNDTDKASRERLSRIETELLSLKEKQAELTQQWEHERSV
MSRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLNEAEKELDEYLGSGK
SMFREEVLGSDIAEIVSKWTGIPVSKLQQSERDKLLHLEEELHKRVVGQNPAVTAVAEAI
QRSRAGLSDPGRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSEYMEKHAVS
RLIGAPPGYVGYEEGGQLTETVRRRPYSVILFDEIEKAHGDVFNVFLQILDDGRVTDSQG
RTVSFTNTVIIMTSNVGSQFILNNTDDDAKELAYETIKQRVMDAARSIFRPEFMNRVDEY
IVFQPLDRDQINSIVRLQLARVQKRIADRKMKIEVTDAAVDLLGSLGYDPNYGARPVKRV
IQQNIENELAKGILRGDFKEEDGILIDTEVTAFSNGQLPQQKLIFKKIESGTADAGKEEE
AFSK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactgctacgtcggcgtttagtggtgtgatcggcgtaggatcggaatcccga
aaggtttctactttctcccatctccaaccttccgttgcttttccggcgaagcccaattcc
ttcaaatcactgaaactgaagcacagcgcgaggctcacgcggaggctcgagcatcggccg
ttcgtcgtccgatgcgaagcttcttccaacggaaggctgacacagcaagagttcacagag
atggcgtggcaatcgatagtttcgtcaccagacgtggctaaagagaataagcagcagatt
gtggagacagagcatttgatgaaagctctcttggagcagaagaacggtttagctcggagg
atcttctctaagatcggtgtggataacactaaggttctagaagcgacagagaagttcatt
caacgccaaccaaaggtgtatggagaatctgctggttcgatgttgggacgtgatcttgaa
ggtctgtttgagagagcaagaaagtataagaaagacttgggagactcttacgtctcggtg
gagcatttggttcttgcttttgctcaagacaagcggtttggtaaacagttgtttaaggat
tttcagatatctgagaagagtttgaaagctgctattgagtccattagagggaaacaatca
gtcattgaccaagatccggaaggtaagtatgaggcgttggagaagtacggaaaagacttg
acagcaatggcgagagaaggaaagcttgatcctgtgattggaagagatgatgagatccgt
agatgcattcagattctatccaggaggactaagaacaaccctgtgttgattggtgaacct
ggtgttggtaaaaccgcaatttcagaaggacttgctcagaggattgtgcaaggagatgta
cctcaagctttgatgaatagaaagttgatatctctagatatgggtgcgcttatagctgga
gcaaagtatcgaggagagttcgaagatagactaaaggctgttctcaaggaagtcacagac
tcagaaggccaaatcattttgttcatcgatgagatccacacagttgttggtgcaggtgcc
acgaatggtgcaatggatgctggtaatctactaaagccgatgcttggtcgaggcgagcta
agatgtataggtgcaacaacgcttgatgagtacaggaagtacatagagaaagatccagcc
ttggaacgtaggtttcaacaggtttatgtcgatcaacccaccgttgaagacacggtttca
attctccgtggtttgagagaaaggtatgagcttcatcacggagttcgcatctcggacagc
gctctagtggaagctgcaattctctccgaccgttatatcagtggccggtttttacctgac
aaagcaattgacttggtcgatgaagcagcagccaaactaaaaatggagatcacatcaaaa
cccacagctctcgacgagctcgaccgcgcagtgattaagctcgaaatggagagactatca
ctaaccaacgacacagacaaagcttccagagaaaggctgagccggatcgaaaccgagcta
ttatcactaaaggagaagcaagccgagctaacacaacagtgggagcacgagaggtccgtc
atgtcccgtctccagtccatcaaagaagagatcgacagagtaaacctcgagatccagcaa
gccgaacgcgagtacgatctaaaccgcgcagcagagctcaaatacggaagcttaaactct
ttgcagcgtcagctaaacgaagctgagaaggagcttgacgagtacttaggctctggcaag
tcgatgtttagagaagaggtgttgggtagcgacatagctgagatcgtgagtaaatggact
ggcatacctgtctccaagctccaacagtcagagagagataaactcttacatttggaagaa
gagctgcataagcgtgtagtgggtcagaaccctgcggtgactgcagtagccgaagcgatc
caacggtcgagagctggtctctctgatcctggccgtccgatagcttccttcatgttcatg
ggaccgacaggtgttggtaaaaccgagctggctaaggccctcgcgtcttacctcttcaac
acggaggaagctctggtgagaatcgacatgagcgagtacatggagaaacacgccgtgtcg
aggctcatcggagctcctcccggatacgtcggctacgaggaaggagggcagttaacggag
accgttagaagaaggccttactcggtcatcctcttcgacgagattgagaaagctcacggg
gatgtgttcaatgtatttctccaaatcttggacgatgggagggttactgactctcaggga
cgtacggtgagtttcaccaatacggttattatcatgacatcgaacgttggttcgcagttt
atcctgaacaacactgatgatgatgcgaaggagttagcttatgagacaattaaacaaagg
gttatggatgctgcaagatcgatctttcgtcctgagtttatgaacagggttgatgagtat
atagttttccagcctcttgaccgcgaccagatcaacagcattgtccggttacagcttgct
cgtgtccagaagaggattgcggacaggaagatgaagatagaggtcacagatgcggcggtg
gatcttcttgggagccttgggtacgatcctaactacggagctagacctgtgaagcgtgtg
atacagcagaacattgagaacgagctggcaaaaggtatcttgagaggggatttcaaggaa
gaagatggcattttgattgatacggaggtcacagcgttctctaatggtcagttacctcag
caaaagctcattttcaagaagattgagtcaggaacagcagatgctggaaaagaagaagaa
gctttctcaaaatag
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