Brassica oleracea (wild cabbage): 106327052
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Entry
106327052 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106327052
KO
K08518
syntaxin-binding protein 5
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106327052
Membrane trafficking [BR:
boe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106327052
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
106327052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Synaptobrevin
Beta-prop_HPS5
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_RIG_2nd
PEP5_VPS11_N
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
106327052
NCBI-ProteinID:
XP_013620517
LinkDB
All DBs
Position
C2:1178910..1185705
Genome browser
AA seq
1088 aa
AA seq
DB search
MFVRKFLQKSSGDGGQKPPPPRGCLITQELDPRLVSHYGIPSTASILAFDSIQSLLAVGT
LDGRIKVIGGDNIEAVLASPKQLPFKNLEFIENQGFLVSISNENDIQVWDLDLRQTMSSL
HWESNITAFSILPGTGYMYVGDEYGMVSVVKYNADEGKLVHLPYYVPTDALAEAAGLSSP
IEYPVVGLLSQPCSRGTRLLIAFSNGLLFIWDASEDRVVLVRGNKYLPMEGKTVDVSLEA
SHDELSDLKLDGKEISSLCWASADGSVLAVGYVDGDILFWDFSDGKNVKVSNNAVKLQLS
SAEKRLPVIVMHWCLDVSRKNCGGKLFIYGGDIVGSDEVLTMLALDWSSGVGGLKCVGRV
DLTLSGSFADMVLSPIASSRQSGVFLFLLTNPGQLQAYDDTSLASLMSQKENNISVSPLP
YPMVVPTRDPHITVAMFAALNVNDKPSLALSEIVLAAKSRTPRTPSGESAQWPLTGGVPG
HIDDYKLERLYMAGYQDGSVRIWDATYPCLSLIYDLVPKVYGIEITGVDASVTAVSFCSK
TSCLAVGNECGMVRLFKLVGHKSGGTLEVVTNTDKQAHPLHQEDGPQWLAAYSFLTSAVC
TLQFVQSTRRLVVGFKCGRVAMLDISAPSVMFVTNSLSDTGSPIKSLCVKSPSAPTDQDY
INSEALDDFILCAMTKDGQTTLIDGNTGKILASCLRPLKNPTAICMHIIEDCYENTEIPS
EEPAGKEKLENKSHMISESESHSPCGEQTAVTETKLVDQRFANSLFLMCSEDALRLYTLK
SLSQGSFESIMEVSLSKPCCWMGILKKEEGECAVLLLYRTGHIEIRSFPDLEVVGESSLL
SLLRWNFKPNMEKTVCSNDFGHLVLVNGCEVAILSFLAHPNGFRIPESLPLLHDKVLAAA
ADATFSHFPVHKKDQDGTPKFLSGIIKGFRSSSEQKLDHQIQDFSHLGNIFSNPPYLKPS
DTGGDDEKIVELNIDDIEIDEPLSILPLNEKDKKEKKDKRTDKERLFDGASSDAQPKTRT
VDEIKAKYRKAGETSAIASQAKDKLLERGEKLERISQRTAELQDGAENFASMAHELAKQM
EKRKWWNI
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtcagaaaatttctgcagaaatcctccggcgatggtggtcagaagcctcctccg
ccacgtggatgtttgataacacaagagttggatcctcgtcttgtctcccactatgggata
ccttcgacggcgtctattctcgcctttgactctattcaatccctcttggctgtgggaaca
ctagatggaaggattaaagtgattggtggtgataacattgaggcggttcttgcatctcct
aagcagttacctttcaaaaacttagagttcattgagaaccaaggctttctggtcagcatc
tcaaatgaaaacgatattcaggtttgggacttggatcttaggcagactatgtcaagctta
cactgggagtcaaacattactgcgttttcaatacttcccggcaccggttacatgtatgtt
ggtgatgagtatggtatggtgtctgttgtaaagtacaatgctgacgaaggaaaattagtg
catcttccttattatgttccaactgatgctttagctgaagcagcagggctttcatcacct
attgagtatcctgttgttggacttctttctcagccttgttcgaggggaactaggttgttg
attgcattttcaaatggattactttttatttgggatgcatcagaagatcgtgtcgtgtta
gttagagggaacaaatacctacctatggagggtaagacagtcgatgtttctctggaagcc
tcacacgatgagctttctgatcttaagctagatggaaaggagataagttctttgtgttgg
gcatcagctgatggttcagttctcgctgttggttatgtcgatggagatatattattttgg
gacttctctgatgggaaaaatgtgaaggtatctaataatgctgttaagttacagttgtct
tcggcggagaaaagacttcctgtcattgttatgcattggtgtttggatgtatctcgcaag
aattgtggtggaaaactctttatctatggtggtgatatcgttggttctgacgaagtactg
acgatgttggcacttgattggtcttctggtgtgggaggtctaaaatgtgttggccgtgtt
gacctgactcttagtggttcgtttgctgatatggtcttgtctccgattgctagttcaagg
caaagtggggtgtttttattccttttgacgaatccaggacaattgcaagcgtacgatgat
acctctctggcttctctgatgtctcagaaagaaaataacatttctgtttctccgctgcca
tatccaatggttgtaccgacaagggatccacatatcaccgtagcaatgtttgctgcatta
aatgtgaatgataagccgtcactggctctttccgagatagtcttagctgcaaaatctaga
accccacgtactccatctggagaaagtgcgcaatggcctctaacaggtggtgttccgggc
cacattgatgactacaagcttgagagactgtacatggcagggtatcaagatgggtctgtg
cgaatctgggatgcaacctatccatgtctgtctcttatttatgacttggtgccaaaggta
tatggtattgagataactggagtagatgcatcagtaacagcagtttccttctgttctaaa
acttcttgtttggctgttggtaacgaatgtggtatggttcgtcttttcaagttggtcggc
cataaaagtggaggaactttggaagttgttaccaacactgacaagcaagctcaccctttg
catcaagaagatggacctcaatggttggctgcgtattccttcctgacttccgcagtttgc
accctgcaatttgtacagtctacaagaagacttgttgtgggatttaaatgtggcagggtt
gcaatgcttgacattagtgcgccatcagtaatgtttgttacaaatagcttatctgacacc
ggttccccgatcaagtcactctgtgtgaaatccccttcagctccaactgatcaggattac
ataaattccgaagctcttgatgattttatcttgtgtgcgatgactaaagatggacagacc
actcttattgatggaaatactgggaaaatactcgcttcatgcttgagacctctgaagaac
ccaactgcgatttgtatgcacattatagaggactgctacgaaaatactgaaattcccagt
gaagaaccagctgggaaggagaaacttgagaacaaatctcatatgatcagtgaaagtgag
agtcattcaccatgtggtgaacagactgctgttacagaaacaaaacttgttgatcagaga
tttgcgaattcattatttctcatgtgttctgaggatgcactgcgcttgtataccttaaaa
tctttatctcagggaagttttgagagcattatggaggtaagtctttcaaagccgtgttgc
tggatgggaatcctaaaaaaggaagaaggggaatgtgcagtactcctactttaccgaaca
gggcatattgaaataagatctttcccggatcttgaagttgtgggagagagctctctgcta
tcacttcttaggtggaactttaagcctaacatggagaagacagtatgttcgaatgatttc
ggccatctcgtcctggtaaatggttgtgaagttgcaatcctttcgtttctggcccatcca
aacggattcaggatcccagagtctttacctttgcttcatgacaaagtccttgcagccgct
gccgacgctacctttagccatttccctgtccataagaaagaccaggatggcactcccaaa
ttcctaagtggcattattaaaggcttcaggtcaagcagtgaacagaagctggaccaccaa
atacaagatttctcccacctgggaaacatcttttctaatccaccatacttaaagccttct
gatactggtggcgacgatgaaaagattgtcgagctaaacatagatgacatcgagatagat
gaacctcttagcatcttgcccttaaacgagaaagacaaaaaggaaaagaaagataagaga
acagataaggaaagactgtttgacggtgcatccagtgatgcacaacccaaaacgagaaca
gttgatgaaataaaggccaaatacagaaaagcaggggaaacctcagcaatagcttcacaa
gcaaaggacaaacttcttgagcgtggagaaaaactcgagagaatcagccaacgcacagct
gagctccaagacggtgctgagaactttgcgtccatggcacatgaacttgctaagcaaatg
gagaagcgaaaatggtggaacatatga
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