Brassica oleracea (wild cabbage): 106327094
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Entry
106327094 CDS
T04124
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
boe
Brassica oleracea (wild cabbage)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
HycH
Motif
Other DBs
NCBI-GeneID:
106327094
NCBI-ProteinID:
XP_013620574
UniProt:
A0A0D3AI27
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All DBs
Position
C2:complement(1575063..1581735)
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AA seq
986 aa
AA seq
DB search
MATATENQWLKGRVKAVTSGDCLVITALTHNRPGAPPEKTITLSSLMAPKMARRGGKDEP
FAWESKEFLRKLCIGKEVAFKVDYKVEAIAGREFGSVFLGNQNLAKVVVQNGWAKVREQG
QQSQGKVSPYIVELLQLQEQAKQEGFGCFSKVPGAAEASIRDLPPSAIGDAGGFDAMGLL
AANKGKPMEGVVEQVRDGSTIRVYLLPEFQFVQVFVAGIQSPSMGRRNTNGNVVETVPAE
SNGDASGESRGPLTSAQRLAASAASSVEVSADPFAAEAKYFTEHRVLSRDVRVVLEGVDK
FNNLIGSVHYSDGEAVKDLGLELVENGLAKYVEWSANMMEEEAKRKLKAAELQCKKDRVK
MWASYVPPATNSKALHDQNFTGKVVEVVSGDCVVVADDAIPYGSPAAERRVNLSSIRCPK
MGNPRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTPGEGATTTADRIMDFGSVF
IPSPSKGDTEEVTTASAISGTQPAGVNIAELLLSRGFGNVVRHRDFEERSNHYDALLAAE
SRALSGKKGIHSAKESPAMHITDLTVAAAKKAKDFLPSLQRIRRIPAVVEYVLSGHRCKL
YIPKLTCSIAFAFSGVRCPGRGEPFSDEAISVMRRRIMQRDVEIEVETVDRTGTFLGSMW
EGRTNVATVLLEAGLAKMQTSFGADRIVEAHILEQAERTAKNQKLKIWENYVEGQEVSNG
STTVETRQKETLKVAVTEVLGGGRFYVQSVGDQRISSIQNQLASLSVKDAPIIGSFNPKR
GDIVLAQFSLDNSWNRAMIVSAPREAIQSPDEKLEVFYIDYGNQELVPYSAIRPIDPSVS
SAPGLAQLCRLAYIKVPSLEEDFGPEAGEYLHTVTLGSGKEFKAVIEERDTSGGKVKGQG
TGTELAVTLIAADEEISVNAAMLQEGIAKMEKRRRFEHKDKQAVLDALEKFQEEARKART
GIWQYGDVESDDEDTAPARKPAGGRR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcgactgagaaccaatggctcaaaggaagagtgaaggctgtaacctccgga
gactgtttagtgatcaccgctttgacccacaacagacctggagctccaccggaaaagacc
atcactctgtcttctctcatggcacctaagatggctcgcaggggaggtaaagatgagcct
tttgcatgggaaagcaaggagtttcttaggaaactctgcattggaaaggaagttgctttc
aaagtggattacaaagtggaagctattgctggaagagagtttggttctgtcttcctcggt
aaccagaatctagcaaaggttgttgttcaaaatggttgggctaaggttagggagcaaggt
cagcagagtcagggcaaagttagtccttacattgtagagctgctacagctccaagagcag
gctaagcaagaaggctttggttgttttagcaaggtccctggtgctgctgaggcatctatc
agagaccttcctccctctgccattggagatgctggaggctttgatgcaatggggctttta
gctgctaataaaggcaaacctatggaaggtgttgtggagcaagtccgagatggtagtact
attcgtgtttatctccttccagagttccagtttgtgcaagtctttgttgctggaatccag
tctccatcaatgggaagaagaaacacaaacggaaacgttgttgagacggttccagctgag
tctaatggagatgcttctggcgagtcaagaggtcctctgacgtcagctcagagacttgct
gcctctgcagcatcatctgttgaggtttctgctgatccttttgcagctgaggctaagtac
ttcaccgagcatcgtgttcttagcagagatgttcgggttgttcttgaaggtgttgacaag
ttcaacaacctgattggttcagtccattactctgatggagaagcagttaaagacttgggt
ctggagctcgttgaaaatggtcttgctaaatacgttgaatggagtgctaacatgatggag
gaagaagccaagaggaagctgaaagctgctgaactccaatgcaagaaagatcgtgtgaag
atgtgggcaagctatgttcctccagctacaaactctaaggcacttcatgaccagaacttt
actggaaaggtagtggaagtggtgagtggggactgtgttgtagttgctgatgatgctatc
ccatacgggagcccggctgcagagagacgtgtcaatctttcgagtatcagatgtcctaaa
atgggcaacccacgtagagaagagaagccagctccttatgctagggaagcaagagagttt
ctgaggcaacggcttattggcaaacaggtcattgttcaaatggaatactcaaggaaagtc
acaccaggagaaggtgctaccacaactgcagataggataatggacttcggctcagtgttc
attccatctccctccaaaggcgacaccgaggaagtaactactgcatcagccatctccggc
actcagccagctggagtcaacatcgctgagcttctcctctcccgtggttttggaaacgtg
gtcagacacagagattttgaagagaggtcaaaccattacgatgctcttctcgctgctgaa
tctcgcgctttgtctggcaagaaaggaatacattctgctaaagagtctccggccatgcac
atcaccgacctaaccgtggccgcggctaagaaggctaaagatttcttgccgtcgcttcag
aggatcaggaggataccagctgttgtggaatatgtactgagtggacatcggtgtaagctt
tatattccaaagctgacgtgtagcattgcgtttgcgttctctggtgttagatgccctgga
cgtggagagcctttctcggatgaagctatctctgtgatgagacgtaggatcatgcagagg
gatgttgagattgaagttgaaacggtggatagaaccggtactttcctaggatcaatgtgg
gaggggaggacaaacgtggcgacggttctgcttgaagctggtttagccaagatgcagact
agttttggtgcagacaggattgttgaagcgcatattcttgagcaggcagagagaactgct
aagaatcagaaactgaagatttgggaaaattatgttgaaggacaagaagtctcaaacggg
agtacaactgtggagactaggcagaaggagactttgaaggttgctgttacagaagtactt
ggaggtggtcggttctatgttcaatctgttggagatcagaggatatcttctattcagaac
cagcttgcttctctgagtgttaaagatgctccaatcattggatcctttaaccccaagaga
ggtgacattgtgcttgcacagtttagccttgacaactcctggaaccgtgcaatgattgtg
agtgcaccacgagaagctattcagtcccctgatgagaagcttgaagtgttctacattgat
tatggaaaccaagagctagtcccttacagcgcaatccgaccaatagatccttctgtctcc
tcagcaccagggcttgctcagctatgcagacttgcttacataaaggttccaagcctggag
gaagactttggtcctgaagctggagagtatctgcataccgtgacgcttggaagcggtaaa
gagttcaaggcagtgatagaggaaagagacacatctggtggtaaagtcaaaggccaaggc
actggaactgaacttgctgtcactctcattgctgctgatgaagagatctctgtcaacgct
gcaatgcttcaggaaggaatagcgaaaatggagaaacgtaggagatttgagcacaaggac
aagcaagctgttcttgatgctttggagaagttccaggaggaagctcgcaaggctaggact
gggatctggcagtacggtgacgtggaatcagatgatgaggacactgctccggctaggaag
cctgctggtggtcgcaggtaa
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