Brassica oleracea (wild cabbage): 106327175
Help
Entry
106327175 CDS
T04124
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106327175
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106327175
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106327175
Enzymes [BR:
boe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106327175
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106327175
Ubiquitin system [BR:
boe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106327175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
106327175
NCBI-ProteinID:
XP_013620700
UniProt:
A0A0D3AHZ4
LinkDB
All DBs
Position
C2:complement(1391041..1399844)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTMVTPPPVDQQEDEEMLVPHSDLVEDPAQPMEVSETETAVSTVENQPAAEEPPTLKFTW
TIPHFSRINTRKQYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAASLPYGWSRYAQ
FSLAVVNQVHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLANDTVYIEAEV
VVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPT
ASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKG
TVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL
EGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDSMVKINDRYEFPLELDL
DREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKE
DLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFR
IQKQTPFQQFKEEVAKEFGIPVQCQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS
NKANTAELKLFLEVELLDERPIPPPEKSKDDILLFFKLYDPEKPELRYVGRLMVKSSSKP
MDITGKLNEMAGFAPDEEIELFEEIKFEPGVMCEHLDKKNSFRLCQIEDGDIICFQKPVV
NKEIECRYPAVPLFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHTYDDVVERVAEKLGL
DDPSKLRLTSHNCYSQQPKPQPIKYRGVDRLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHSTKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYK
IFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFF
LVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYG
AFEQYLGLEHTDTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatggtgactccgcctcccgtcgatcagcaagaggatgaggagatgcttgttccg
cattcagatttggttgaggatcctgctcagcccatggaagtttccgaaactgagactgct
gtgagtactgtggagaatcagccagcagctgaggagcctcccactctgaaattcacgtgg
actatcccacacttctctaggattaacaccaggaagcagtactctgatgtgtttgttgtt
ggaggttacaaatggcgcatattgattttcccgaaagggaacaatgttgaccatttgtcc
atgtacttggatgttgctgatgctgcgagtttgccttacggttggagcagatatgctcag
ttcagcctggctgttgtcaatcaagtccacaccagatacaccatcagaaaagaaacgcag
catcaattcaacgcgagagaaagcgactggggatttacgtcattcatgcctcttagcgaa
ctttatgatcctagtagaggatatctggcgaatgatactgtttacattgaagctgaagtc
gttgtgcgtaaggttcttgattattggtcttacgattccaaaaaagagaccgggtttgtt
ggtctcaagaaccaaggtgcaacttgttacatgaattctcttctacagacactataccac
ataccttacttcagaaaggctgtataccacatgccaaccactgagaacgatgcgcccaca
gcaagtatacctttggctctccaaagtttgttttacaagctccaatataacgacaccagt
gttgcgacaaaagagctgacaaagtcgtttggttgggacacatatgattctttcatgcaa
catgatgtccaagaactcaatagagttctctgcgagaaacttgaggataaaatgaaggga
actgttgtggagggaacaatacaacagctatttgaagggcaccacatgaattatatcgag
tgcataaatgtagattacaaatctacacggaaagaatcattttatgaccttcagctggat
gttaaaggctgcaaggatgtttatgcgtcgtttgacaaatatgttgaagttgaacgcctt
gaaggagacaataaatatcatgcagaaggacacggattacaggatgcaaaaaaaggtgtt
cttttcatagactttccaccggttcttcagctccagctcaaaaggtttgaatatgacttc
atgagggattccatggtgaagataaatgatcggtatgaatttccgctggaactggacctt
gatagagaggatgggaagtatttatcccctgatgctgacaggagtgtccgcaacctttat
actcttcacagtgtcttagttcatagtggaggagtacatggtgggcattattacgcattt
ataaggcccacgctctcagatcaatggtataaatttgatgatgaacgagtaaccaaagaa
gatttgaaaagggcactggaggagcaatatggtggtgaagaggagctaccacaaactaat
cctggttttaataaccctcctttcaaattcacaaagtactcgaatgcatatatgcttgta
tatatccgggaaagtgacaaagataaaataatctgcaacgttgatgagaaagacattgct
gagcacttaagggtgaggctgaagaaggaacaagaagaaaaggaagacaaaagaaaatac
aaggcacaagctcacctttttacgataattaaggttgcaagagatcaagaccttaaggaa
caaattgggaaggatatatattttgatcttgttgatcatgacaaagttcgtagtttccgg
atccagaaacagacaccatttcaacagtttaaggaggaggtggccaaggaatttggtata
cctgttcagtgtcagagattctggatttgggcaaagcgacaaaaccatacctatcgtccc
aatcgcccccttacacctcaggaggaattacaaccggttggacaaattagagaagcatct
aacaaggcaaacactgcagaacttaagctgtttttggaagtagagctactggatgaacgt
cctattcctcctcctgaaaaatcaaaagacgatattcttcttttctttaagctttatgac
cccgagaagccagagttaaggtatgttggcagactgatggtgaaaagttccagtaagcct
atggatataactggaaaactgaatgaaatggctggctttgctcctgatgaagaaatagaa
ctttttgaggaaatcaagtttgagcctggtgttatgtgcgaacacctggataagaaaaat
tcattcagattgtgtcaaatcgaggatggagatatcatttgctttcagaagcctgttgtt
aacaaggagattgaatgccgctacccagctgtgcctttgtttcttgaatatgtccagaat
cgacagctggtccgatttcgtgctctggaaaaacctaaagaagatgaattcgttctggag
ttgtcaaagttgcacacttatgacgatgtcgtggaaagagtggcggagaagcttggcctt
gacgatccatccaagcttaggcttacatctcacaattgctattcccagcaacccaagcct
cagcctatcaaataccgtggagtagaccgtttgtcagacatgttagttcactacaatcag
acgtctgatattttgtattatgaagttcttgacattcctcttccagaattgcaaggtctt
aaaaccttaaaagttgcttttcatcattccacgaaggaagaagtggtaatccacaatatc
agactacctaaacaaagtacagtcggagatgttattaatgaactaaaaacaaaggtggag
ctctcgcatccagatgcagaactgagaatacttgaggtgttttaccacaagatctacaag
atttttccattaactgaaagaattgagaatataaacgaccagtactggactttgcgagct
gaggagattccggaagaagagaaaaacattggtccaaatgatcgcttaattcttgtgtac
cactttgctaaggagactggacagaatcagcaagtgcaaaactttggggagcccttcttc
ttggtaatccatgaaggtgaaactcttgaagaaatcaagaaccgtatccaaaagaagctt
catgtatcagatgaggactttgccaagtggaagtttgcgtttatgtcaatggggcgtccg
gagtacttgcaggactcagatgttgtttacaatcgctttcagaggagagatgtctatggt
gcttttgagcagtatctggggttggagcacactgataccactcctaaaagggcttatgct
gcaaaccagaaccgacacgcgtatgagaagccggtgaagatatacaattag
DBGET
integrated database retrieval system
