Brassica oleracea (wild cabbage): 106327184
Help
Entry
106327184 CDS
T04124
Name
(RefSeq) probable galacturonosyltransferase 4 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00520
Amino sugar and nucleotide sugar metabolism
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106327184
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
boe01003
]
106327184
Enzymes [BR:
boe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106327184
Glycosyltransferases [BR:
boe01003
]
Polysaccharide
Structural polysaccharide
106327184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
CwsA
BatA
Motif
Other DBs
NCBI-GeneID:
106327184
NCBI-ProteinID:
XP_013620712
UniProt:
A0A0D3AV21
LinkDB
All DBs
Position
C2:41625095..41628128
Genome browser
AA seq
627 aa
AA seq
DB search
MLKFQNVVLFFLLLTVAAPILLYTDSYTSVKTPFSKREFLEDVTALTFNSNENRLNLLHR
EESPVDVRRGVVGVVYSKQDSDSSIKARDHQVSARVLYEAQSQTDNTIKQVTDAASEMDK
PKVMHASDGNAHNRERMHVQLTQKTSGKVDEQETKGSGAEKESGNVRMPDAQVRHLKDQL
IRAKVYLSLPAAKANAHFVRELRLRIKEVQRLVVDVAKDSDLPKNAIEKLKAMEQTLAKG
KEIQDDCSTVVKKLRAMLHSAEEQLRVHKKQAMFLTQLTAKTIPKGLHCLPLRLTTDYYA
LNSSEQQFPNQEKLEDNQLYHYALFSDNVLATSVVVNSTIANAKHPSKHVFHIVTDRLNY
AAMRMWFLDNPPGKATIQVQNVEEFTWLNSSYSPVLKQLSSRSMIDYYFRAHHANSDTNL
KFRNPKYLSILNHLRFYLPEIFPKLSKVLFLDDDIVVQKDLSGLWSVDLKGNVNGAVETC
GESFHRFDRYLNFSNPLISKNFDPRACGWAYGMNVFDLHEWKRQNITEVYHRWQNLNQDR
DLWKLGTLPPGLITFWKRTYPLDRKWHVLGLGYNPSVNQRDIERAAVVHYNGNLKPWLEI
GIPKYRGLWSKHVDYQHVYLRECNINP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtttcaaaatgttgttcttttcttcttgctcctcacggtagcagctccaatc
cttctctacacagattcctacacctccgtcaagaccccattttctaaacgcgagttcctc
gaggacgtaaccgccctgactttcaattccaacgagaatcgtttgaatctgcttcatcgg
gaggaatctcctgtagatgttagaagaggagtcgtgggtgtggtctattccaaacaagac
tctgattcgtctataaaagctagagaccaccaagtctctgctcgagttctttatgaagct
cagtctcaaactgacaataccatcaaacaagtcactgatgctgcctcagagatggataag
ccaaaggttatgcacgcttctgatggcaacgcccacaatagggaaagaatgcatgttcag
ttgacccagaaaacttctggaaaggttgatgagcaagagactaaaggttctggagctgag
aaagagagcggaaacgtgaggatgcctgatgctcaggtgaggcatcttaaagatcagctg
atcagggcaaaggtttatctttcacttccagctgcaaaggctaatgcacattttgtgaga
gagcttcgtctccgtattaaagaagttcaacggctggttgtagatgtcgccaaggattcg
gatctgccaaagaacgctattgaaaaactgaaagcgatggaacaaacattggccaaaggc
aaggagatccaagatgactgttccacagtggtcaagaagctacgtgcaatgctccactcg
gcagaggagcagctacgtgtccataagaagcaagccatgttcttgacacagttgactgct
aagacgattccaaagggccttcactgcctccctctacgcctcactaccgattattacgct
ttaaattcgtctgaacaacagtttcccaatcaggagaaactagaagataatcagctgtat
cactatgccctcttctctgacaatgttttggctacatcagttgttgttaactctaccata
gccaatgccaagcatccctcaaagcatgtcttccacatcgtcacggacagactcaactat
gcggcaatgaggatgtggttcctagacaacccaccaggcaaagccaccatccaggttcag
aacgttgaagaatttacatggctgaattcaagctacagtcctgttctcaaacagctcagt
tctcggtcgatgatagactactacttcagggcacaccatgcaaattcagataccaacttg
aagttccggaatccaaaatacttgtccatccttaaccatcttcgtttttacttgcctgag
atcttccccaagctcagcaaggtgctcttcttggatgatgatatagttgtgcagaaggac
ctttctggtctttggtcagttgatctcaagggtaatgtcaacggtgctgtcgagacttgt
ggggagagctttcatcgctttgaccgttatctgaacttctcgaatccactcatctccaag
aattttgaccctcgagcttgtggatgggcgtatggtatgaatgtttttgatctccacgag
tggaagaggcaaaacatcacagaggtttaccatagatggcagaatctgaatcaagaccga
gatttgtggaagctagggacactgccgcctggtctcatcacattttggaaacgaacatac
ccattagaccggaaatggcacgtactgggtcttggatacaacccgagtgtgaaccagagg
gatattgaaagggcagccgtcgtgcactataatggcaacctcaaaccatggctagagatt
gggattccaaaatatcgaggcctctggtcaaagcacgtcgactaccagcacgtttacctc
agagaatgcaacatcaatccttag
DBGET
integrated database retrieval system
