KEGG   Brassica oleracea (wild cabbage): 106327311
Entry
106327311         CDS       T04124                                 
Name
(RefSeq) SEC12-like protein 2 isoform X1
  KO
K14003  prolactin regulatory element-binding protein
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106327311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106327311
Membrane trafficking [BR:boe04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106327311
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_1st KorB_C
Other DBs
NCBI-GeneID: 106327311
NCBI-ProteinID: XP_013620889
LinkDB
Position
C2:complement(42041305..42043737)
AA seq 399 aa
MANQTPESNQPSNTQTYGFPIYAADWIPEETVRSKIDKDQDNSEDVGGESSSSTSRSCIV
LAGGGGEGRSGIKNVIVICLVDLDTKSLSEQPLGRIVLGTDLPYRMAVHPRGGGLVCALP
NSCKRFDWESIISPREGDQGGEEGEEVINELKDVGQQLALAFNQEGSVLAAGGEDGTLRI
FEWPCMKTLLDESKAHASVKNLTFSESGKFLVSLGGPLCRVWDVNTSAAIASLSKEKDEM
FAYCRFSVDNAGNEVLYIAANTERGGSIITWDTTTWKRRRSKLMKNYSISAFNVSADGKL
LALGNMEGDVLIIDSTKMKTHQLVKKAHLGLVTALTFSPDSRCLVSVSFDSRAKLTVIEK
TPEKQGVNWLVMLLLCVLLYVVSYYFLMAKGIIGKENSL
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcgaatcaaactccagaaagcaatcaaccgtcgaatacgcagacctacggcttcccg
atctacgccgccgactggatccccgaagaaaccgtcagatcgaaaatcgacaaggatcag
gacaattccgaagatgtcggcggcgagtcttcgtcgtcgacctcccggagctgcatcgtt
ctggccggaggaggtggagagggaagaagcgggatcaagaatgtcatcgtaatctgtctt
gttgatctcgacaccaaatctctctctgaacaacctcttggtaggattgtgcttggtact
gatctgccttacaggatggctgttcatcctcgtggaggtggtcttgtttgcgcattgcct
aacagttgcaaacggtttgattgggagagcattataagtcctagagagggtgatcagggt
ggtgaagagggagaggaagtgattaatgagttgaaagacgttggacagcagttagctttg
gcgtttaatcaggaagggtctgtgcttgctgctggtggggaggatgggactttgaggatt
tttgaatggccttgtatgaaaacgttacttgatgagtctaaggcacatgcatcagtgaaa
aacttaactttcagcgaaagtggtaagtttcttgtatctcttggaggtccactttgtcgg
gtttgggacgtaaatacttctgctgccattgccagtctatcaaaggagaaggatgagatg
tttgcctactgcagattctccgtcgacaatgcaggcaatgaagttctttacattgctgca
aacactgaacgtggtgggagtattataacatgggatacaacaacatggaaaagaagacgt
tcaaagcttatgaaaaactactctatatctgcctttaatgtctcagctgatgggaagctt
cttgcactcggaaacatggaaggggatgttttgataattgattcaacaaaaatgaagact
caccaattggtaaagaaagctcatctcggtttggtcaccgcactgactttctcccctgat
tcaaggtgcttagtgtcggtatcttttgactcaagggcaaagctaactgtcattgaaaaa
acgcctgaaaaacagggagtaaactggctggtgatgttgttgttgtgcgtgttgctatac
gtggtttcctattatttcttgatggcaaaggggatcataggcaaagaaaatagcctctaa

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