Brassica oleracea (wild cabbage): 106327332
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Entry
106327332 CDS
T04124
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106327332
Membrane trafficking [BR:
boe04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106327332
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
106327332
NCBI-ProteinID:
XP_013620914
UniProt:
A0A0D3AM65
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Position
C2:11353101..11360915
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AA seq
1259 aa
AA seq
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MANYLAQFQTIKNSCDRIVAAVEDVSDLWPTVKELFEQHQPLKRAVLTNKTRNPVLVENL
PVEFILTTDARLRSRFPHEQYLYWFREPYATIVLVTCEDLDEFKNILKPRLKLIVQNDEK
EWFIVFVSKAHPSNDQATKNAKKVYAKLEVDFSSKKRERCCKLDIHGPDANFWEDLELKI
TECIRNTLDRRVQFYEDEIRKLTEQRFMPIWNFCNFFILKESLAFIFEIAHLHEDALREY
DELELCYLETVNMPGKQRDFGGFDSEDDQAALLKPGSKPLTQMVHDDSFREFDFRQYLFA
CQSRLLFKLNRPFEVSFRGYSFVISFAKALTFHESVLPFCLREVWVLTACLALLDATASH
HNDGVVAPDIEKEFYRLQGDLYSLSRLKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKP
AVWPSLPPDASSEVLEKEKTLLQATSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTGN
ISEIFDGRPGFTEGSGLEASPRTPSSLKVQAAPMSRTNSSPGNFESPLDRPMRLAEIFVA
AEHALRLTISDHDLLKTLSSVQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCF
KHGKYDLAANSYEKVCALYAGERWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDK
SLFSSKERQAFQSEVVNIAHSEMKNPVPLDVSSLITFSGNTGPPLQLSDGDPGNLSVTVW
SGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGRNTITFDLPPQKPGSYVLGV
VTGQIGRLRFRSHSFSKGGPGETDDFMSYEKPTRPILKVSKPRALVDLSAAVSSALLINE
AQWIGVIVRPINYSLKGAILHIDTGPGLKIEDSYGIEMERYVETDCDAGATKAEVSVEDS
HVSPKLDSEVLNLCDGKIVFSEWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGM
RTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIV
LDAWLDLQDGFVHGKSDGRPTSTFFPLVVSPGSRAAVVFSISIEKTMPSGKDLQLPESIL
NIKYEIHGDRAAGAHNPVDAADHSVADAERRDLVFKSAIVLQRPVLDPCLTVGFLPLPSD
GLRVGKLITMQWRVERLKELEGSEAVEQQHDEVLYEVNANSENWMIAGRKRGYVSLSEEQ
GSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSYCVPVK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattatcttgctcagttccagacgattaagaactcctgcgatcgcatcgtcgcc
gccgtcgaagatgtgtctgatctgtggcccactgttaaagaattgttcgaacaacatcag
ccattgaagagagcagtcttgactaacaagactcgaaatccggttctcgttgagaacttg
cccgttgagttcatattaactacagacgccagacttcgcagccggttcccgcatgagcag
tatttgtactggttccgagaaccatacgcaactattgttcttgtcacctgtgaggatctt
gatgagtttaagaacattcttaaaccacgtctgaaattaattgttcagaacgatgagaag
gaatggtttattgtatttgtatctaaggctcacccgagtaatgatcaagcaactaagaat
gccaagaaagtatatgccaagcttgaagttgatttcagttccaaaaagagagaaaggtgc
tgtaagctggatatacatggccccgacgcaaacttttgggaggatctagaattaaagatt
accgagtgcatcaggaataccttggataggcgcgttcaattctacgaggatgagattcgc
aaactcaccgagcagcggtttatgccaatatggaacttttgtaactttttcatcctaaag
gaaagtttggctttcatatttgagattgctcatcttcatgaagatgctttacgtgaatat
gatgaactagagctctgctatttggaaacagttaatatgcctgggaaacagagggatttt
ggaggattcgacagtgaagatgaccaagctgcgctgctgaaaccaggaagcaaaccactg
acacagatggttcatgatgattcttttagagagtttgattttagacagtatctctttgcc
tgtcaatctcggctgttgttcaagttgaatcgtccttttgaagtttcatttaggggatat
tcttttgttattagctttgcaaaggccttgaccttccatgagagtgtacttcccttctgt
ttgcgggaagtttgggtattgactgcatgtttagcgctgctcgatgcaactgcttctcat
cacaatgatggcgttgttgcacctgatattgagaaggagttctaccgtcttcagggtgat
ctctattcactgtcacggcttaagttcatgagacttggatatctgataggatatggaaca
gacatagaaaaaagtccactgaacagcgcttgtctcagtatgctgccttggccaaaacca
gcggtctggccatctcttccaccagatgcttcctctgaggtgcttgaaaaagaaaagact
cttctacaagcaacttcaaggaccaagcactttggtatccaacggaagcctttgcccctt
gaaccatctgtccttctacgtgtggctaacagaagaagggcttctctttctactggaaat
atttctgaaatatttgatggccgcccaggttttactgaaggatcaggtttagaagcgtct
ccgagaaccccttcatcacttaaagtacaagcagctcccatgtcgagaacaaattcctca
cctggaaattttgagagtccgcttgataggcctatgaggcttgctgaaatttttgttgca
gctgaacacgctctgcggcttaccatttcggatcacgatttgttgaagacattgtcatct
gttcaggatttcgagcataaatatcttaatctaaccaaaggtgccgccgaaaactatcac
cgttcttggtggaagagacatggagtcgttcttgatggtgaaatcgcagctgtctgcttc
aagcacgggaaatatgatttggctgcaaactcttatgaaaaagtttgcgccctttatgcg
ggtgaaagatggcaagatttgctagcagaagtcttgcccaatttagctgagtgtcaaaag
attcttaatgatcaagctgggtacatgtcatcttgtgttaggctactttcgttggataag
agcttattctcgtccaaggagcggcaagcgtttcagtccgaggttgtcaatattgcacac
agtgaaatgaagaacccagttcccttagatgtgtcatcattgataacattttctggaaat
actggtcctccgcttcagttgagtgatggagaccctgggaatctatctgtcactgtgtgg
agtggctttcctgatgatatcacccttgattcgcttagtcttaccttggtagcgaccaac
aacactgacgaaggcggccaggctttgaagagttcagctgcaactgtactaaagcccgga
aggaatactatcacatttgatttgcctccacaaaaaccgggttcctatgttctgggagtc
gttactggccagattggtcgcttgagattcaggtctcacagcttttcaaagggtggtcct
ggagaaactgatgattttatgagttatgaaaagccaaccagacctatcctcaaggtgtcc
aaaccaagagctctggttgatctttctgcagctgtatcttctgcgctgcttataaatgaa
gctcagtggattggtgtcattgtacgtcctattaattactcactgaaaggcgccatcctg
cacattgatactggtccagggctaaagattgaagactcatacggcattgagatggagaga
tacgtagaaacagattgtgatgctggtgcaacaaaagctgaagtttctgtagaagatagc
catgtctctccaaaacttgattcagaggtacttaatctctgcgacggtaaaatagttttc
tcagaatgggcgagcaatgtgagttctattctgtgggtccctgttcgtgcattgagtgag
aagcttgctagaggttcatcttcagtcactccactgaaacaagatattttagagggaatg
agaactgtggctctgaaacttgaatttggtgtgcatcataaccagatatttgagagaacg
atagctgcacatttcaccgacccttttgacgtgactacaagggtggcaaacaaatgcaat
gatggcacattggtcttgcaggttatgctacactcccttgtcaaggccaacttgatagtt
cttgatgcttggcttgatcttcaagatggatttgttcatggaaaaagtgatggaagacca
acttccacgttttttccgcttgttgtgtctccggggtctagagcagcagtcgtgttcagt
atatccatagagaagacaatgccatcagggaaagatttgcagctaccagagagcattctg
aatatcaaatatgaaatccatggtgatagagctgctggagcacacaacccagtggatgct
gcagatcactctgtagctgatgctgaaaggagagatttggtgttcaagagtgctattgtt
ttgcagcgtccagtgcttgatccttgcctgacagttggatttcttccacttccttctgat
ggtcttagggtcgggaaacttattaccatgcagtggagagtcgaaaggctgaaagagctc
gagggaagtgaagctgtagaacagcaacatgatgaggtgttatacgaagtcaatgcaaat
tcggagaactggatgattgcgggtaggaagagaggttatgtctctctctcagaggagcaa
ggttcaagagtggtaatatcgatactatgtgttccattagttgcgggttatgtccgtcct
cctcagctcggtttgccaaacgtggaagaagcaaatgtaagcagcaatccaccaggtcct
cacttagtgtgcgtcttgcctccacttctcagttcttcttattgcgtccctgtcaagtag
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integrated database retrieval system
