Brassica oleracea (wild cabbage): 106327509
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Entry
106327509 CDS
T04124
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03030
DNA replication
boe03410
Base excision repair
boe03420
Nucleotide excision repair
boe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106327509
03410 Base excision repair
106327509
03420 Nucleotide excision repair
106327509
03430 Mismatch repair
106327509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boe03032
]
106327509
03400 DNA repair and recombination proteins [BR:
boe03400
]
106327509
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106327509
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106327509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
AAA_22
AAA_30
RCF1-5-like_lid
AAA_19
Rad17
BRCT_2
AAA_18
AAA_assoc_2
nSTAND3
RuvB_N
AAA_17
AAA_5
Zeta_toxin
Sigma54_activ_2
AAA_14
AAA_28
TsaE
Gp44_lid
NTPase_1
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
106327509
NCBI-ProteinID:
XP_013621122
UniProt:
A0A0D3AKE1
LinkDB
All DBs
Position
C2:complement(6227107..6234060)
Genome browser
AA seq
960 aa
AA seq
DB search
MSDIRKWFMKAHEKGNGNAPKPTKGADAKETASVKSEQASEDLETAAARKKTSKYFAKDK
AKAKEEKGVEELPAKRKLKTDSDDLGKPRPRKAIKVDDDDDDDFEVPSAKKTRDSTPSKK
LKTGSGRGVATKAVDNDEADDGEDAQEKDTPVKTGGRGRGGRAASGGGRGGGGRGRGGFM
NFGERKDPPHKGEKEVPDGSPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSK
KTTYLLCDEDIGGKKSEKAKELGTEFLTEDGLFDMIRSSKPVKKSLPEKTNKSTEKVSAQ
PKISPQKDETRGKPLAKSSPNKAPPPSSPAKGKKKIIQSSLPWTEKYRPKVPNEIVGNQS
LVTQLHNWLSHWHEQFGGSGSKGKGKKLTDASAKKAVLLSGTPGIGKTTSAKLVSQMLGF
QAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAIASNIDKSKHPKTVLIMDEVDG
MSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLA
HVAKAEGLEVNDIALEELAERVNGDIRLALNQLQYMSLSMSVIKYDDIRQRLLSSAKDED
ISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLIVQENYVNYRPSSAGKDEAKRMDL
LARAAESIADGDIINVQIRRHRQWQLSLSSCVASSILPASLMHGSREVLEQGERNFNRFG
GWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETLRVDYLPLLLNRLTSPLQTLPKDEA
VSEVVEFMNSYSISQEDYDTIMELAKFKGRANPLEGVAPAVKTALTKKYKETSKTRMVRA
ADMVQLPGLKKAPKKRIAAMLEPNVESLGDEDGVPLAENEEENESDAEDSEEATNGEKLE
SNLKQLNARGIQVEVDLKGAGSSGGTRKAAGKGRGRGKAADASAAEKKATGRGAGAKRKR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattaggaagtggtttatgaaagcccatgagaagggcaatgggaatgctcca
aaaccgacgaaaggcgcggatgctaaggagactgcatcagtaaaatcagagcaggctagt
gaagacctggaaactgctgctgctcggaaaaaaacgagcaagtattttgctaaagataaa
gctaaagctaaagaggagaaaggggtggaagagcttcctgccaagaggaaacttaagact
gattcagatgatttaggcaagcctcgtccaagaaaggctatcaaggttgatgatgacgat
gatgatgattttgaggtgcctagtgcgaagaagactcgtgatagcactcccagcaaaaaa
ctaaagactgggtcaggtagaggtgtcgcaactaaagctgttgataatgacgaggctgat
gatggtgaagacgcccaagaaaaggatactcctgttaaaacaggcggaagaggccgtggc
ggtagagctgcatcagggggtggaagaggaggtggaggtagagggcgaggtgggtttatg
aattttggtgaaagaaaagacccgcctcataaaggagaaaaggaagttcctgacggcagc
cctgattgcttagctggattgacatttgttattagtggaacacttgacagtttagaaaga
gaagaagcagaagatctgataaagcgtcacggtggtcgtgttacaggctctgtgagcaag
aaaacgacttaccttttgtgtgatgaagacatcggcggaaagaaatctgaaaaagctaaa
gagctgggcactgagttccttacagaagatggcctatttgacatgatccgttcctctaaa
cccgtaaaaaagtctctacctgaaaaaacaaacaaaagcaccgaaaaagtcagcgcacag
ccgaagataagtcctcagaaagacgagacaagaggcaaacctttagcaaaaagttcgccg
aacaaggcccccccaccatcttccccggcaaagggaaaaaagaaaattatccagtcttcc
ttgccatggacggaaaagtacagaccgaaggttccaaatgagattgttgggaatcagtca
ttggttactcagcttcacaactggctgtcccattggcatgagcaatttgggggtagtgga
agtaaaggaaaggggaagaaattaactgatgctagtgccaagaaggctgtacttttgagc
ggaacacctggtattggaaaaacaacatcagcaaagttggttagtcagatgcttggtttc
caggcagttgaggttaatgctagtgacagtcggggaaaagcgaactcgaatattgccaaa
ggaattggtggtagcaatgcaaattctgtaaaagaacttgtcaataacgaagccatagct
tctaacattgataaatcaaagcacccgaagactgttctaatcatggatgaagtagatgga
atgtctgcaggcgacagaggaggtgttgccgatctcattgctagcattaaaatatcaaag
attcctatcatctgcatttgtaatgaccgatacagtcagaaactgaagagtttagtaaac
tactgtctgcccctcaattaccggaagcccacgaaacagcagatggcgaaaaggctggca
catgttgctaaggcagaaggccttgaagttaatgatattgccctggaggaactcgctgag
agagtgaatggcgacatacggttggccctgaatcagctccaatatatgagcctgtccatg
tcagtcatcaagtacgatgatattaggcagcgcctgctaagcagtgcgaaggatgaagat
atttcacctttcacagctgttgacaagttgtttggttataatggtgggaagctgagaatg
gatgaacggattgaccttagcatgagtgattttgatttggttccccttattgtacaggaa
aactatgtcaattatagaccaagttcagccggcaaagatgaggcaaaacgaatggactta
cttgcccgtgctgctgaatctattgcggatggagatattatcaacgtgcagattcggaga
cataggcaatggcaactctctctatcttcctgtgtcgcatcttctattctcccagcttcg
ttgatgcatggatcaagggaggtgctagagcagggagaacgtaatttcaatagatttggt
gggtggcttggcaagaattctacggcgggaaaaaatacgaggttgctggaggatctgcat
gttcatgtccttgcttcccgtgaatccagctctggaagggagactcttcgcgttgattat
ctaccccttctcttgaaccgcttgacgagtccactccagacactgcctaaggatgaagct
gtttcagaagttgttgaattcatgaactcatactctataagccaggaggactatgatact
attatggagttggcgaaatttaagggacgtgcaaatccattagagggtgtcgcacctgca
gtgaaaacagccttgactaaaaaatataaggagacgagtaaaaccagaatggtacgtgct
gctgacatggtgcagcttccggggttgaaaaaagcgccgaagaagcgaatagctgcaatg
cttgaaccaaatgttgaaagtttgggagatgaagatggcgtgccgttagcagagaatgaa
gaagaaaacgaatcagacgctgaagactcagaagaggcaaccaatggagaaaagctggag
tcaaatctaaaacaactgaatgctagagggatccaagttgaagtggatttgaaaggagct
ggaagctcaggaggtacaagaaaggcagctggtaaaggcagggggagaggcaaagcagca
gatgcttctgcggctgagaagaaggctacaggacgaggggctggtgccaagagaaagaga
tga
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