Brassica oleracea (wild cabbage): 106327594
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Entry
106327594 CDS
T04124
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106327594
Transcription factors [BR:
boe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106327594
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
106327594
NCBI-ProteinID:
XP_013621228
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Position
C2:42800104..42806014
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AA seq
590 aa
AA seq
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MAASSSSNASFFGVREEDQTHLLPPNPSAAVAPPPPHHQPLQSQQPLEAPPQKKKRNQPR
TPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKR
KVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC
GTKEYRCDCGTLFSRRDSFITHRAFCDALAQESARHPTSLTSLPSHHFPYGQNTNSNNNS
SSMMLGLSHTGAPQHLDHHSGDVLRLGSGEGVGGGAASRSSSDLIAANVSGYFMQDQNPS
FHDQQQGFLAASNNIKPSPMNFQQSLMQFSHDSHNSPSSNLFNLSFLSGNNGAASATSNQ
NAAAVSSGNLMISNHFDGENAIGGGGGGEGSTGLFPNNLISSADRTSSGAVPSLFSSSMQ
NPISTPQMSATALLQKAAQMGSTSSSNNNNNNNGSSNNNNNNASSILRNFGSGMYGENES
NLYDLMNSFSNPDPTGNNVNGVHSPFGSYGGVNKGLNADKQSMTRDFLGVGQIVRSMSGS
GGVQQQQQQHGNSRERVGSSPDSVDRNSTTLNPCGGPATSPPYGIHHASF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatcctctaatgcttccttctttggagttcgagaagaagatcaaact
caccttcttcctccgaatccctccgcggccgtcgctcctcctcctcctcaccaccagcca
ctgcagtctcagcaacctcttgaagctccaccgcagaaaaagaagagaaatcaaccaaga
actccaaattccgatgcagaagtcatcgctttatctccaaagacactaatggctacaaat
agattcatatgcgaagtatgcaacaaaggttttcagagagaacagaatctacaacttcat
cgaagaggacacaatctcccatggaaacttaagcagaagtcgaccaaagaagtgaagagg
aaagtgtatctttgtccggagcccacgtgcgtccaccatgatccgtcacgtgctctcgga
gacctcaccggaatcaagaaacattattaccgtaagcacggtgaaaagaagtggaaatgc
gagaaatgttctaagcgttacgctgttcaatcggattggaaagctcactccaagacttgt
ggtaccaaagagtatcgttgcgactgtggtacactcttctcccggcgagatagtttcatt
acacatagagccttctgtgacgcgttggctcaagagagtgcgagacacccaacttctttg
acttctttaccaagtcatcacttcccgtacggacaaaacaccaactccaacaacaacagt
tcaagcatgatgcttggtttgtcccacacgggggccccacagcatcttgatcatcactct
ggcgacgttctccgacttggaagcggcgaaggagtaggtggaggagccgcctcacgctct
tcatctgatctcattgctgcaaatgtttcaggttacttcatgcaagaccaaaaccctagc
tttcatgatcaacaacaaggatttttggctgcaagcaataacatcaagccatcaccaatg
aattttcaacagagtctgatgcagttctcgcatgatagccataactctccttcctccaat
ctcttcaatctcagtttcctctctggaaacaacggagctgcttctgctacaagcaaccag
aatgctgctgctgtttcttccggtaatcttatgatctcgaaccattttgatggcgaaaat
gctattggaggcggaggaggaggggaaggaagcacgggtctctttcctaacaatctgatt
agctcggcggacagaacaagctcaggagcagtgccttcactctttagctcatcaatgcaa
aatcccatatcaacacctcaaatgtcagccactgctcttcttcaaaaagctgctcaaatg
ggttcaacctcaagcagcaacaacaacaacaacaacaacggaagcagcaacaataataat
aacaatgcctcatccattctaagaaactttgggagtggaatgtacggagaaaacgagagt
aatctctatgatttgatgaactctttctctaaccccgatccaacgggaaacaacgttaat
ggagtacattctccgtttggttcgtacggaggagtgaacaagggattaaacgctgataaa
caaagcatgactagagactttcttggagttggacagatcgtaagaagcatgagtggaagc
ggaggggttcaacaacagcaacaacaacatgggaatagtagagaaagagttggctcttcg
ccggattctgtcgatagaaacagcacgactttgaatccttgtggtggtccggcaacctca
ccaccgtatggaatccatcatgctagtttctag
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