KEGG   Brassica oleracea (wild cabbage): 106327699
Entry
106327699         CDS       T04124                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106327699
   03400 DNA repair and recombination proteins [BR:boe03400]
    106327699
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106327699
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106327699
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT HEAT_EZ HEAT_2 TOR1L1_N fn2
Other DBs
NCBI-GeneID: 106327699
NCBI-ProteinID: XP_013621384
UniProt: A0A0D3AWS4
LinkDB
Position
C2:complement(46996181..47002024)
AA seq 1123 aa
MAALNNLTEHLEAFVDVTRSPTHHAESLKAIATSLEKGVLSINQLVVEMDMYLTTTDDVV
RARGILLLAEMLDYLKSKPLDNAVVHSLIGFFTAKLAEWRSVRGALSGCLALIKRKGVAG
LVTAVDAEAVAKSMAQSIQVQSLALYDRKLCFELLECLLEQYPEAMINLGDLMVYATCEA
IDGEKDPPCLMVAFHVVELLGRLFPSPSGPVASEASDLFEFISCYFPLHYTHTKGDEASI
PREDLSRGLSLAISSTPFFEPYAIPLLLEKLSSSLPVAKVDSLKCLKDCAVNYGVSRMKK
HYKDLWPALKDALYASTKTDLSFGLESLTSPGFEMGEIHRAAVNLLQRLVKQDISFLGLV
VEDIRVNMVFDTISRYLRYEEMLDTSKLEVLVVSQILSVSARSSVESCNIIFQTFFFRLM
NTLGIVEKTSTGDLVHNENSTVSTRLYHGGLHLCIELLTTSKDLIPSSEECTSTPESAQQ
SWCSIVSRFSASLIEAFTSAVQSSNDDCSADAYLGVKGLLAMGMFRGGSSPVSRSEFEKI
LTTLTSIIAANSAKTVKWELALKALVCMGSFIDRYSESEKAMSYMAIVVENLVSLVRSSH
CSLPSPMILEATSEVCSTRPTYVEKMVEGFEEAFCSSFSDFCVNGNFKSIENCSQLLECV
TNKLLPRLTEIDGLEKSLVHFAISMWNQIESSVVFSYDFNGREFVEAATKTMGEIVGVAS
VDSQNSIIQKAYNVISSSTLLAMESIPLTFAALEGLQRDLSTRDELILSLFASVIIGASP
KASIPDVKSLVHLFLVSFLKGYIPAAQALGSMVNKLGTGLEEACDTIFHESSASGSSIPS
DDSSKTIGGSEALLSKICLGFYGSLDLQTHAITGLAWIGKGLLMRGDKRVNEIALVLVEC
LKSTNSSGNALHPSAMKHAADAFLTLMSDSEVCLNRKFHAVIRPLYKQRFFSITVPILES
LIVNSQTPLSRTMLHVALAHVVSNVPVTVILDNTKKLLSVILEGLSVLSVDSVHKETLFS
LLLVLSGTLTDIKGQQSVSDNAHRIIECLVKLTSYPHLMVVRETAIQCLATLLELPHGRI
YPFRREVLQAVTKALDDPKRRVREEAIKCRQAWTSISSRSTPF
NT seq 3372 nt   +upstreamnt  +downstreamnt
atggctgcactgaataatctcaccgagcatctcgaagctttcgtcgacgtcactcgttcc
cctactcaccatgctgagagtctgaaagcgattgctacttccttggagaagggtgtcttg
tctataaaccaattggtcgtggagatggacatgtatttgacgactactgatgatgttgtc
cgagcacgaggtattctcttgcttgcggagatgctggattatctaaagtcaaagcctttg
gacaatgcagttgtccatagtctcattggtttctttaccgctaagctggcagagtggaga
tcggtgcgcggtgcactttctggttgcttggctctgattaagaggaaaggcgtagctggt
ttggtcactgctgttgatgcagaagctgtggccaagtcaatggcacagagtattcaagtg
cagtctttagcactgtatgatcgcaagctctgttttgaactattggagtgccttctagag
caataccctgaagctatgataaatttgggagatttgatggtttatgctacatgcgaagcc
atcgacggagaaaaagaccctccatgcttaatggtagcttttcatgtagtagagcttttg
ggtcgattgtttcccagtccctccggtccagttgcgtctgaggcctctgatctttttgag
tttataagttgctacttcccacttcactatacgcatacaaaaggtgatgaagctagtatt
ccaagagaagacctttcaaggggactatctctggcaatctcttcgacgccttttttcgaa
ccgtatgctattccattgcttcttgaaaagctttcatcttctctaccagtcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctgtgaactatggagtaagcagaatgaagaag
cactataaagatctttggcccgctttaaaagatgcactttatgcttccactaagacagat
ttgtcctttggtctagaatccctcactagtccagggtttgaaatgggtgagatccacaga
gcagctgttaatcttcttcagaggcttgtcaagcaagatatctcgtttttaggtcttgtt
gttgaagatatacgcgtaaacatggtcttcgataccatttctagatacttgcggtatgaa
gaaatgcttgacacgagcaaactggaggttcttgttgtcagtcagatactgtctgtgtct
gccagatcttctgttgagtcatgcaatataatctttcaaacctttttcttccgccttatg
aatactctagggattgtagagaaaacgtcaactggtgatcttgtccacaacgaaaactcg
acggtttctactagactctaccatggaggtcttcatctttgcatcgaacttcttacaaca
tcaaaagatcttattccgagctccgaggaatgtacctcaacacctgaaagcgcgcagcaa
tcatggtgctctatagttagcaggttctcagcttcactgatcgaggcgttcacttctgca
gtacaaagctctaatgatgattgtagtgcagatgcatatcttggagttaaaggtttgctg
gctatgggtatgttccggggcggctcttctcctgtatcgagatctgaattcgagaagata
ttgacgaccttaacatcaatcatcgcagccaatagtgccaaaacagtgaagtgggaattg
gcattgaaagcgcttgtctgcatgggttcatttattgatcggtattctgagagtgaaaag
gctatgagctacatggctatagttgtcgaaaatttggtctcgctggttcgctctagtcat
tgttctcttccatctccaatgatattagaagcaacttcagaagtttgctctactaggcca
acgtacgtagagaaaatggttgaaggatttgaagaagctttctgctccagtttctctgat
ttctgtgtcaatggaaacttcaagtcaatcgaaaattgttctcagctcctggagtgtgtg
accaataaattgcttccacgtctgacagagatcgatggtctcgagaaaagcttggtgcat
tttgctatcagtatgtggaatcaaattgaatcctctgttgttttcagttatgattttaat
ggcagggagtttgttgaggcagcaacgaaaacaatgggagaaattgtaggagttgcttcg
gtagattcacagaatagtataatccaaaaagcttataatgtgatctcatcaagcacgctt
ctagctatggagtctattcctctaacctttgctgcgttagagggtttacaacgcgacctg
tccactagggatgagttgatactttcactatttgcgtcagttatcataggtgcatctccc
aaggcatccattccagatgtgaagtcacttgtacatctgtttttggtatcctttcttaag
ggttatatcccagcagctcaagctttgggttcaatggttaacaaattgggaacgggtttg
gaagaagcatgtgatacaatatttcacgagagttctgcatctggaagcagtattccttct
gatgactctagtaaaactatcggtggaagtgaggcacttttgtcaaagatatgtttaggt
ttctatggttcgctggaccttcaaacccacgctataacaggtctagcgtggattgggaaa
ggtttactcatgcggggtgataaaagagttaatgagatagctcttgtacttgtggaatgc
ttaaaatccactaacagttccgggaatgctctgcatccttctgccatgaaacatgcagct
gatgcattcctcacactaatgtctgattcggaagtgtgtctgaacagaaagtttcatgca
gttatacggccactctataagcaacggtttttctctataacagttcctattttggagtcg
ttgattgtgaattcccagactccactctcaaggacaatgttgcatgtcgctctcgcgcat
gttgtatccaacgttccagttacggtcatattggacaataccaaaaagctgctctcggtg
atattggaaggcttgtctgtcttaagcgttgactctgtgcataaagaaacacttttcagt
ctgttactggttttatctggaacgcttactgatattaaaggtcaacaatcagtcagtgat
aatgcacacagaatcatcgaatgcctggtcaagcttacatcatacccacatctaatggtt
gtaagggagacggcgattcagtgtcttgctactttgttggaattgccccatggaagaatc
tatcctttcagaagagaggttttacaagcagtaacaaaggcactcgatgatccaaaacgt
agagttagagaagaagcgattaaatgcaggcaggcttggacgtcgatctcatccaggagt
acccctttctga

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