Brassica oleracea (wild cabbage): 106327817
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Entry
106327817 CDS
T04124
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106327817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106327817
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106327817
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
106327817
NCBI-ProteinID:
XP_013621545
UniProt:
A0A0D3AM88
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Position
C2:complement(11542855..11548622)
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AA seq
695 aa
AA seq
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MATEQEFTRASRVSGASSSVGCYSDEDYKDEEEEEEEEEEEMEETEKDEEEEEPRVRVTC
GGRRNGSPGSYNKWMMLGRILDPRSKLVQEWNRVFLLVCATGLFVDPLFLYTLSVNDACM
CLLVDGWLALTVTALRSVTDLLHLWNILIQFKIARRWPYPSGDSDGDINKGDGTRVRTRV
APPYVKKNGFFFDLFVILPLPQVVLWVVIPSLLKRGSVTLVVSILLLTFLFQYLPKIYHS
IRHLRRNATLSGYIFGTVWWGIALNMVAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTM
GCDLRMLSCKEPVYYGTTEMVLDRARLAWARNHQARSVCLDSDTNYTYGAYQWTIQLVSN
ESRLEKILFPIFWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHA
TTSKKQAMHLKMRNIEWWMKKRHLPFGLRQRVRNYERQRWAAMRGVDECEMVQNLLEGLR
RDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRG
HLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLD
AQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRFTLTSLSFIRP
RRPLSRCASLGEDKLRLYTAILTSPKPNPDDFDDY
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagcaagaattcacacgcgcatcacgcgtctcaggtgcttcaagcagcgta
ggatgttactcagacgaagattacaaggacgaggaagaagaggaagaagaggaagaagaa
gagatggaagaaactgagaaagatgaagaagaagaagaaccacgtgtgcgggttacgtgc
ggaggaagaagaaacgggtcaccaggttcctataataaatggatgatgttgggtcgaata
cttgacccgagatccaaactggttcaagaatggaacagagtctttctcctcgtctgcgcg
acgggccttttcgtggacccactttttctatacaccctctcggtaaacgacgcgtgtatg
tgtctgctcgtcgacggttggctcgctctcaccgtcactgcgttacgctccgtgaccgat
cttttgcacttatggaacattttgattcagttcaagattgctcgccggtggccttatccc
agcggagatagcgacggcgatattaacaaaggagatgggacacgtgtacgtacgagagtt
gctccaccttacgttaagaagaatgggttcttcttcgatctcttcgtcatcttaccatta
cctcaggtggtgttgtgggtggtgataccttctcttctaaagagaggatctgtgactttg
gtggtctcaatcttgcttttaacattcctcttccaatatctaccgaagatctaccactcc
attcgccatctccgtcgaaatgccactctgtcaggttacattttcggtaccgtctggtgg
ggaatcgcactcaacatggtcgcttatttcgtcgccgctcatgcagcaggagcctgttgg
tacttgttaggggtccaaagatcagcgaaatgtcttaaagaacaatgtgaaaacacaatg
ggttgcgacctaaggatgttgtcatgtaaggaaccagtgtactatggcacgaccgagatg
gtccttgacagggctagactggcttgggcacgaaaccaccaagcacgatcagtttgctta
gatagcgacaccaactacacatatggtgcttatcaatggaccattcaacttgtgagcaat
gaaagccggttggagaaaatccttttccctattttttggggtctcatgactctcagcaca
tttgggaatttggagagcacaacagaatggtctgaggttgtcttcaatataatagttcta
acaagtggtcttcttcttgtcaccatgttgatcggtaacataaaggtgtttctgcacgca
acaacttcaaagaagcaagcaatgcacctaaaaatgaggaacatagagtggtggatgaag
aagagacatttaccattcgggttgaggcaacgagttcgcaactacgagcggcagagatgg
gccgccatgcgcggggtagacgagtgtgagatggttcaaaaccttctagaaggtcttagg
agagacatcaagtaccatctttgtttagacttagtccggcaggttccgttgtttcagcat
atggatgatttggtgcttgagaatatatgcgatcgcgtgaagtctctcattttcacaaaa
ggagaaactatccaaaaagagggagatgcagtgcagagaatgttgtttgtagtaagaggc
catcttcagagtagtcagttactaagagacggagtcaaaagctgttgcatgttaggtcca
ggtaattttagcggtgacgagctcctctcatggtgtctccgacgaccattcgtggagagg
ctaccgccgtcttcctcaacgcttgtaacgctcgagaccaccgaagcatttggactcgac
gctcaagacgttaagtacgtgactcaacatttccgttacacttttgtcaacgagaaagtc
aaacgcagtgcccgctattattctcctgggtggcgaacttgggccgcggttgcggttcag
ctcgcttggaggaggtacaagcataggtttactttgacgtctctgtcgttcataaggccg
aggagaccattgtcgagatgtgcgtcactaggagaagataaattgaggctctatacagcc
atcttaacctctcctaaacccaatcctgacgatttcgatgattattaa
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