Brassica oleracea (wild cabbage): 106327875
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Entry
106327875 CDS
T04124
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106327875
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106327875
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106327875
NCBI-ProteinID:
XP_013621624
UniProt:
A0A0D3ANR2
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Position
C2:16525294..16527127
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AA seq
406 aa
AA seq
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MTLLHLSLSLFSCLLLVLGPTFIDSAHVSDPELVVQEVNQKINASRRNLGVLSCGTGNPI
DDCWRCDKKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDPSDKDVVNPKPGTLRHAVI
QDEPLWIIFARDMVIKLKEELLMNSFKTIDGRGANVHIAGGACITAQYVTNIIIHGINIH
DCKKRGNAYVRDSPSHYGWRTASDGDAISIFGGSHVWVDHCSLSNCADGLVDAIHGSTAI
TISNNYLTHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPQSKWKKWNWRSEGDLFLNG
AFFTPAGGRASSSYAKASSLSARPSALVASVTGNAGALYCKKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcttcacttgtctctctccctattctcatgtctcctccttgtcctaggtccg
accttcatcgactctgctcatgtctccgaccccgaactagtagttcaagaagtaaaccag
aagattaatgcgtctaggaggaatcttggtgtcctctcatgtgggacaggaaaccctatc
gatgattgttggagatgcgacaagaaatgggagaagaaccgacaacgactagctgattgt
gccattggatttggtaaacacgcaataggcggccgtgacggcaaaatctacgtggtgacc
gaccctagcgacaaagacgtggttaaccctaaaccgggaaccctaagacacgcagtgatc
caagacgagccgctatggatcatctttgcacgtgacatggtcataaaactgaaagaagaa
ctgctcatgaactcgttcaagaccattgacggccgtggagcgaacgtccatatcgccggt
ggcgcgtgcatcactgcccagtacgtgaccaacatcatcatccacggcatcaacatccac
gactgcaagaagagagggaatgcttacgtcagagattctccgtcgcattacgggtggagg
acggcatctgacggtgacgctatctcgattttcggagggtcccacgtgtgggttgaccac
tgctcgttgtctaactgcgcggacggtctggtcgacgccattcatggatctacggctatt
acgatctctaataactacttgactcaccataacaaggtgatgcttttgggacacagtgat
tcgtacacgagagacaagaacatgcaagtcaccattgcgtttaatcattttggtgaaggg
cttgttcagagaatgcccagatgtaggcatggatattttcatgtggtaaataacgattat
acgcattggcaaatgtatgcaattggtgggagtgcagctccaactataaacagtcaaggc
aataggtttcttgctcccaatgaccatgtcttcaaagaggtgactaaatacgaagatgca
ccacaaagcaaatggaagaagtggaactggagatcagaaggtgaccttttcctaaacggt
gcgttttttacgcctgcgggtggaagagcctcttcgagctacgctaaggcttcaagtttg
tcggctagaccatccgcgttggtggcttccgtcacgggcaatgctggtgctctctactgt
aagaaaggatctcgatgttaa
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