Brassica oleracea (wild cabbage): 106328152
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Entry
106328152 CDS
T04124
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106328152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106328152
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106328152
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
106328152
NCBI-ProteinID:
XP_013621987
UniProt:
A0A0D3BIJ2
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Position
C3:51381896..51385322
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AA seq
769 aa
AA seq
DB search
MANERYSRSNRDDRDSSVDRSPEREGRHRNQVRDRDGDSKRRDSDHYRPSRRDDREEERD
RGKDRARDREGSRDRDKHHERSKDKEGRSKRKEREEENENREGKKKSRFADGSSERRSSV
EDVAEGSGAMNGASGVEIEGAASYSSTALETTSLAPRHTLPTKVSSISTKDENKGVSNVR
SHEVHGKSSTDGRTSSTAGESSASSSLDALAKAKKAIELGKGIADRFKKLSSMNQGTKST
SEGSSHTRLQSSTTTPAVSAGTSSASALSHAVFPGPESTSNIEAVRKAQELAAKMAFRHD
PKFSSTLNYFSGQAPTETMAVTQKPTKPPVLRVDALGREIDENGNVISVTKPSNLSTLKV
NINKQKKDSFQILKPQLEVNPEENPHFDPRMGIDKNKILRPKRMSFEFVEEGKWTRDAES
LKLKSQFGEAKARELKVKQAHLAKASDGINPNLIEVSARAPRKEKPKEVIPDVEWWDASV
LTSGIYGDIADGIITDNDLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKREQKKLRT
QRRLAKEKEKQEMIRQGLLEPPKAKVKMSNLMKVLGPEATQDPTKLEKEIRTAAAEREQA
HVDRNTARKLTPAEKREKKERKFFDDPTTTLETIVSVYKVNKLSHPKTRFKVEMNARQNR
LTGCSVMTEDMSVIVVEGKSKEIKRYGKVMLKRINWEEAVKKEGEEEDEDEEENSENNKC
WLVWQGSFAKQSFRRFHVQECLTESAAKKVFSDAGVAHYWDLAVNYTDD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgagagatactccaggagcaacagggacgatcgtgattcgagtgtggatcgt
tcgccggagcgtgaaggcagacaccggaaccaagtccgtgatcgcgatggcgactcgaag
cgtcgcgattcggatcattatcggccgtcgaggcgcgacgatagggaggaagagagagat
agaggtaaggatagagctcgggacagggaagggagtagagatagggataagcatcacgag
aggtctaaggataaggaagggaggagcaagaggaaagagagagaggaagagaatgagaat
agggaagggaagaagaaatctaggtttgctgatgggagtagtgagaggagaagcagcgtt
gaggatgtagctgaggggtctggggccatgaacggagcttctggcgtcgagattgagggc
gcagcttcatatagttctactgcattggaaacaacttcactggcccctagacacaccctg
cccactaaggtatcttcgatatctacaaaggatgaaaataagggagttagtaatgtcagg
tctcatgaggttcatggaaaatctagtacagatggaagaacatcgtcaacagctggggaa
agtagcgcaagctcgtctcttgatgcattagcgaaagctaagaaagccatagagcttgga
aagggaattgcggatagatttaagaagctttcttcgatgaaccagggtactaagtcaact
tcagaaggtagttcacataccagattgcaatcatcgactaccactcctgctgtatctgca
ggaacatcttctgcttcagcactgtcacatgctgtcttccctggccctgagagtacttcc
aacattgaagctgttaggaaagctcaggagttggcagcaaagatggcattccgtcatgat
ccaaagttctcttcaactctcaattatttctcaggacaggcacccacagagacaatggct
gttacacagaaaccgaccaaaccccctgttctgcgtgtggatgcacttggaagggagata
gatgaaaatgggaatgtgattagtgtgactaaaccaagcaatcttagtacattaaaggtt
aacatcaacaaacagaagaaagattcttttcagattcttaaaccccaactggaagtaaat
ccagaagaaaacccccattttgatccaaggatgggtattgataaaaacaagattttgaga
ccaaaacgtatgagttttgagtttgttgaggaaggcaaatggactagggatgctgagagt
ctgaagttaaagagtcaatttggtgaagcaaaagcaagagaactgaaggtgaagcaagcc
catctggctaaggccagtgatggtatcaatccaaatttgatagaagtatccgcacgtgcc
ccgagaaaagagaagcccaaggaagtaatcccagatgtcgagtggtgggatgcaagtgtc
ctcaccagtgggatatatggcgacatagctgatggtatcattaccgataacgacctgaag
atagaaaaactcacacattacattgagcatccgcgtcccatagagccacctgcagaagca
gcgcctccaccaccccagcctcttaaactgacaaagagggaacagaagaagctgcgaacc
cagaggcgtctagcaaaagaaaaggagaaacaggagatgatcagacaaggtttgcttgaa
ccaccaaaagcaaaggtgaaaatgagcaacctgatgaaggttcttgggcctgaagcaaca
caagacccaaccaagcttgaaaaggagatccgcacagcagctgccgaacgtgagcaggct
cacgtggacaggaacacagcaaggaagctaactcctgcagagaaacgtgagaagaaagag
aggaagttcttcgacgatccaacaacaacgctggagacaatagtgtcggtgtacaaggtc
aacaagctttctcatcctaaaactcgattcaaggtggagatgaatgcaagacagaacaga
ttgacgggatgtagtgtgatgaccgaggatatgagtgtgattgtggtggagggcaagagt
aaagagataaagagatacgggaaggttatgttgaagcggataaactgggaagaggcggtg
aagaaggaaggagaggaagaagatgaagacgaagaggagaatagtgaaaataacaagtgc
tggttggtttggcaaggaagctttgcgaaacagagtttccgtaggtttcatgtacaagag
tgcttaacggaatcagctgccaagaaagtattcagtgatgcaggtgtcgctcactactgg
gatctcgctgtcaactacacagacgactaa
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