KEGG   Brassica oleracea (wild cabbage): 106328176
Entry
106328176         CDS       T04124                                 
Name
(RefSeq) peroxisome biogenesis protein 12
  KO
K13345  peroxin-12
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    106328176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106328176
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    106328176
SSDB
Motif
Pfam: Pex2_Pex12 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-C3HC4 zf-RING_UBOX PRIMA1
Other DBs
NCBI-GeneID: 106328176
NCBI-ProteinID: XP_013622014
LinkDB
Position
C3:22364044..22367190
AA seq 389 aa
MLFQVGGDGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFYAALM
LVLEGHSLRTTDASFAESLYGLRRKSARLRLRKGSGEEEVQHSGLEKRQRILSVVFLVVL
PYFKSKLHAIYNKEREARLRESLWGMVDQGFDEADFFTGEEPVVSRGDSGNQEVSVRVQL
ATKIKKFISVCYPWIHASSEGLSFSYQLLYLLDATRFYSLGLQALGIQVCRATGQELMDT
SSRISKIRNHERERLRGPPWLKTVQGALLTCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA
EERLTAPTVYPPPPPPPAPKVAKEGIPLPPDSSLCALCLQKRANPSVVTVSGFVFCYACV
FKYVTKYKRCPVTLIPASVDQIRRLFHDT
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgctgtttcaggtgggaggcgatggcacacgccctaccttcttcgagatggctgcggct
cagcagcttccagctagcctccgcgccgctctcacatactcactcggcgtttttgctttg
agaagatcgtttcttcataaaatcttagactacgaggacgagttctatgctgctctgatg
cttgttctcgaaggacatagcttacgaaccacagatgcttcgtttgctgaatcattgtat
ggtttgaggaggaagtcagcgagattgaggttgaggaaaggttccggagaagaagaagtt
caacattctgggttagagaaacgccagaggatcctttctgttgtgtttctggttgtgtta
ccttatttcaaatcgaagttgcatgctatatataacaaggagagggaagcgaggctcagg
gaaagtttatggggaatggtggatcaagggtttgatgaagctgacttcttcacaggagag
gagccagttgtttcaagaggggatagtgggaatcaagaggtttctgttcgagtgcagtta
gctacaaagattaaaaagtttatatctgtgtgctatccttggatacatgcatcaagtgaa
ggattatcattcagttaccagctcttatatctactggacgctactagattctattctctc
ggccttcaagctcttgggatccaagtttgtcgagccacagggcaagaactgatggatact
tcttcaagaatttcaaagatacggaaccatgagcgtgagagacttcgtggtcctccatgg
ttaaaaacagtgcaaggggctcttcttacctgttcatatgcggttcttgactacgcccaa
accggtttgattgcagcagtttttatctttaaaatgatggaatggtggtatcagtctgct
gaagaaagattgacagctccaactgtgtaccctccacctccacctcctccagccccaaag
gtggctaaagaaggaatccctctacctccagacagttcgctctgtgccttatgcttgcaa
aaacgtgcaaacccatcagttgtcacagtctctggatttgttttctgctatgcttgcgtg
ttcaagtatgtcacaaagtacaagcgatgtccagtgacattgatcccggcaagcgtggat
cagataaggaggctgtttcacgacacttaa

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