Brassica oleracea (wild cabbage): 106328176
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Entry
106328176 CDS
T04124
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106328176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106328176
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
106328176
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-RING_UBOX
PRIMA1
Motif
Other DBs
NCBI-GeneID:
106328176
NCBI-ProteinID:
XP_013622014
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Position
C3:22364044..22367190
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AA seq
389 aa
AA seq
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MLFQVGGDGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFYAALM
LVLEGHSLRTTDASFAESLYGLRRKSARLRLRKGSGEEEVQHSGLEKRQRILSVVFLVVL
PYFKSKLHAIYNKEREARLRESLWGMVDQGFDEADFFTGEEPVVSRGDSGNQEVSVRVQL
ATKIKKFISVCYPWIHASSEGLSFSYQLLYLLDATRFYSLGLQALGIQVCRATGQELMDT
SSRISKIRNHERERLRGPPWLKTVQGALLTCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA
EERLTAPTVYPPPPPPPAPKVAKEGIPLPPDSSLCALCLQKRANPSVVTVSGFVFCYACV
FKYVTKYKRCPVTLIPASVDQIRRLFHDT
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttcaggtgggaggcgatggcacacgccctaccttcttcgagatggctgcggct
cagcagcttccagctagcctccgcgccgctctcacatactcactcggcgtttttgctttg
agaagatcgtttcttcataaaatcttagactacgaggacgagttctatgctgctctgatg
cttgttctcgaaggacatagcttacgaaccacagatgcttcgtttgctgaatcattgtat
ggtttgaggaggaagtcagcgagattgaggttgaggaaaggttccggagaagaagaagtt
caacattctgggttagagaaacgccagaggatcctttctgttgtgtttctggttgtgtta
ccttatttcaaatcgaagttgcatgctatatataacaaggagagggaagcgaggctcagg
gaaagtttatggggaatggtggatcaagggtttgatgaagctgacttcttcacaggagag
gagccagttgtttcaagaggggatagtgggaatcaagaggtttctgttcgagtgcagtta
gctacaaagattaaaaagtttatatctgtgtgctatccttggatacatgcatcaagtgaa
ggattatcattcagttaccagctcttatatctactggacgctactagattctattctctc
ggccttcaagctcttgggatccaagtttgtcgagccacagggcaagaactgatggatact
tcttcaagaatttcaaagatacggaaccatgagcgtgagagacttcgtggtcctccatgg
ttaaaaacagtgcaaggggctcttcttacctgttcatatgcggttcttgactacgcccaa
accggtttgattgcagcagtttttatctttaaaatgatggaatggtggtatcagtctgct
gaagaaagattgacagctccaactgtgtaccctccacctccacctcctccagccccaaag
gtggctaaagaaggaatccctctacctccagacagttcgctctgtgccttatgcttgcaa
aaacgtgcaaacccatcagttgtcacagtctctggatttgttttctgctatgcttgcgtg
ttcaagtatgtcacaaagtacaagcgatgtccagtgacattgatcccggcaagcgtggat
cagataaggaggctgtttcacgacacttaa
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