Brassica oleracea (wild cabbage): 106328492
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Entry
106328492 CDS
T04124
Name
(RefSeq) DNA mismatch repair protein MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03430
Mismatch repair
boe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106328492
03460 Fanconi anemia pathway
106328492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106328492
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
106328492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106328492
NCBI-ProteinID:
XP_013622395
UniProt:
A0A0D3B8C0
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Position
C3:19463692..19467493
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AA seq
748 aa
AA seq
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MTDGSPLAVAMEEEESTAMAMEVEESPSPSIAPRDPPKIQRLEESVVNRIAAGEVIQRPV
SAVKELVENSLDADSTSISVTVKDGGLKLIQVSDDGHGIRREDLPILCERHTTSKLSKYE
DLFSLSSMGFRGEALASMTYVAHVTVTTITKGQIHGHRVSYRDGVMEHEPKACAAVKGTQ
IMVENLFYNMIARRKTLQNSADDYGKIVDLLSRMAIHHNNVSFSCRKHGAVKADVHSVVS
SSRLDSIRSVYGVSVAKSLIKVEVSSGESSGCAFDMEGFVSNSNYVAKKTILVLFINDRL
VECSALKRAVEIVYAATLPKASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIMIDMI
QSEVELKLRNTNDTRTFQEQKVEYIQSTLKSSKSDTPVSPLPSGQKTPKVPVHKMVRTDS
SDPAGRLHAFLQPKPHNLPDTVSSLSAVRSSIRQRRNPKETADLSSVQELLSGIDSCYHP
GLLETVRNCTYVGMADDVFALVQYQTHLYLANVVNLSKELMYQQTLRRFAHFNAIQLSDP
APLSELILLALQEEDLDPENNEKDHLKERIAEMNTELLMEKVEMLEEYFSVFIDSDGNLS
RLPVILDQYTPDMDRVPEFLLCLGNDVEWEDEKACFQGVSAAIGNFYAMHPPLLPNPSGD
GVRFYTKTNEKSSQENPALGGNVEMESVLDQDLLSDAETAWAQREWSIQHVLFPSMRLFL
KPPASMASNGTFVKVASLEKLYKIFERC
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggttcgcctcttgcggtggcgatggaagaggaagagtctacggccatggcg
atggaggtggaagagtctccgtctccgtcgattgcaccgagagacccgccgaagatacaa
cggctagaagagtcagtggtaaaccgtatcgcagcgggtgaagtaatccagcgtccagtt
tcggcggttaaggagctcgtcgagaatagcctggacgccgactcaacttccataagcgtc
actgttaaggacggtggcttgaagctaattcaagtctccgacgatggccacggcattaga
cgtgaagacttgccgattctatgcgagagacatacgacgtcgaagctgagcaagtatgaa
gatttgttctctcttagttcgatgggttttagaggagaggcacttgctagtatgacttac
gttgctcatgttactgtcaccactatcaccaaaggccagattcatggtcacagagtgtct
tacagagatggtgtgatggagcatgagccaaaggcgtgtgcggctgtcaaaggaactcaa
ataatggtggagaatttgttttataatatgattgctagaaggaagacacttcagaactct
gctgatgattatggaaaaatagtagatttgctgagccggatggccattcatcacaataac
gttagcttctcttgtcgaaagcatggagctgtcaaggctgatgttcactctgtcgtgtcg
tcttcaaggcttgattctatcagatcagtttacggtgtgtcagttgcgaaaagcttgatt
aaagtagaagtctcctctggtgaatcctccggttgtgcttttgatatggaaggttttgtg
tccaattcgaactatgttgctaagaagaccattttggtgctttttattaatgatagattg
gtggaatgttcagctttaaaaagagccgttgagattgtttatgctgcaacattaccaaaa
gcatccaaaccttttgtctatatgtcgatcaatttgccacgggagcatgttgatatcaat
attcacccaacaaaaaaagaagtaagccttttaaaccaggaaatcatgatcgatatgata
cagtcagaggttgaactgaaactgaggaacacaaatgatactaggacgtttcaagagcag
aaagtggaatacattcaatctacgctgaaatcctcgaaaagtgatactccagtttctccg
ctgccttctggacaaaaaacaccgaaagttcctgtgcataaaatggtgagaacggattca
tctgatccagctggaaggttacatgcgtttttgcaacctaagccccataatctacctgac
acggtttctagcttgagtgcagtaaggtcttctataagacaaagaagaaacccaaaggaa
actgctgatctttctagtgtccaggaacttctttctgggattgacagctgctaccatcca
ggtttgctggagacagtaaggaattgcacatatgttggaatggcagatgatgttttcgct
ttagttcagtatcaaacacatctatatctagcaaatgtcgtgaacctcagcaaagagctc
atgtatcagcaaactcttcgtcgttttgctcattttaatgcaatacagcttagcgatcca
gcccctctgtctgagttgatattgttggctctgcaagaggaggatctagatcctgaaaat
aacgaaaaagatcatctgaaagaaagaatcgccgaaatgaatacagaactccttatggaa
aaggtagagatgttagaggagtatttcagcgtgttcattgattccgatgggaatttgtca
cggcttcctgtcatactcgaccagtatacacctgacatggatcgtgttcctgagttttta
ctatgcttgggaaatgatgttgaatgggaagatgagaaggcttgctttcaaggagtttct
gcagctattgggaatttttacgccatgcatcctcctcttttgccaaatccatctggtgac
ggtgttcggttttatactaagacaaatgagaagagctctcaggagaatccagctttaggg
ggtaacgtcgagatggagtcagttcttgaccaagaccttctctcagatgctgaaaccgca
tgggcgcaacgtgaatggtcaatccaacatgtgctgtttccgtctatgagattgttctta
aagccaccagcctccatggcttcaaacggaacttttgttaaggtagcatcccttgaaaag
ctgtacaagatatttgaacggtgctaa
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