Brassica oleracea (wild cabbage): 106328544
Help
Entry
106328544 CDS
T04124
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
106328544
Enzymes [BR:
boe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
106328544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Pam16
CBM_11
Motif
Other DBs
NCBI-GeneID:
106328544
NCBI-ProteinID:
XP_013622465
LinkDB
All DBs
Position
C1:577755..586456
Genome browser
AA seq
698 aa
AA seq
DB search
MNEVRRMAKRKAGREEGGGSGTGESRPGERKSKRVVEKIASSSMICFLLLLLLPIAFSQP
TRNLDGISARAPTVQQIRNRHGAREVIVDNGIIRVSFSSPQGLITSIKYKGIDNVLNPHV
RTRGYWDITWQGENIRGLDGIEGTNFRIITQNEEQVEISFSRKWNGGSKHIPLNIDKRYI
IRTNTSGIYAYGVFERLSEWPEVEMGQVRLVFKLNTDRFRYMVVADDRQRQMPTDNDRDI
HRGHAKGLAYKEAVQLTNPADLKFKNQVDDKYQYSCEVKDNKVHGWISTKSHVGFWLISP
SGEYRSGGPSKQELTSHVGPTAITSFISGHYVGRDMVTTYKTGEAWKKVFGPVFIYLNSD
STGNNPRHSLWEDAKRQTEDEVEAWPYDFVASSDFPSRQERGTVTGRLLVNDRFLTPAQS
AYIGLAPPGEAGSWQTNTKGYQFWTQTNETGYFTIDNVRPGTYNLYGWVPGFIGDFQYQN
RVNVAAGSEISLDRVVFKPPRNGPTLWEIGVPDRTAREYFVPEPYKDTMNPLYLNHTDKF
RQYGLWQRYTELYPNHDLVYTIGVSNYSQNWFYAHVTRNIDKSTYVPTTWQIVFQLPYVN
RRGSYTLQLALASAARANLQVRFNNEYSRPLFSTGNIGRDNAIARHGIHGVYRLYSVNVP
GRLLRTGTNTIYLSQAKATGPFEGLMYDYIRLEAPSRA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggtgaggagaatggcaaagagaaaagcaggaagggaggaaggaggtggctcc
ggcaccggtgagagccggcccggagaacggaagtcgaaacgcgttgtggagaagatagct
tcttcgtcgatgatctgtttccttctgttgcttcttcttccaatcgctttttctcagcca
acaaggaacttagatggaataagtgcaagagctccaacagtgcagcagataagaaacaga
catggagctagagaggtgatagtggacaatgggattatcagagtcagtttctctagtcct
caaggacttataactagcatcaaatacaaaggaatcgataatgttcttaatccacatgtc
cgaactcgagggtactgggacattacatggcaaggagaaaacattcggggcttggatgga
attgaaggaaccaactttagaattataactcaaaacgaagaacaagtggagatttcattc
tcaagaaaatggaatggtggttctaaacatattccactaaatatagataaaaggtatatt
atacgaacaaatacgtcaggaatctacgcatacggagtcttcgagagactttccgaatgg
ccagaagtcgagatgggtcaagttcgattagtattcaaactcaacactgatagattccgt
tacatggtggtggcagatgaccggcaaagacaaatgccaaccgacaatgaccgtgacatc
caccgtggccatgccaagggtcttgcttacaaagaggctgtacaattgactaatcctgct
gacctaaagttcaaaaaccaggtggatgataaataccagtactcatgtgaggtcaaggac
aacaaggtgcatggttggatctcgaccaagtcccatgtcggtttctggctcatctcaccg
agcggcgaataccgctcgggtggacctagcaagcaggagctcacgtcgcacgtcggtccc
acggccatcaccagctttataagcgggcattatgttggtcgggacatggtgacaacgtac
aaaactggtgaagcgtggaaaaaggtcttcggacctgttttcatttacttaaactctgat
tctaccggcaacaatcctcgacattcattatgggaagatgctaaacgacagaccgaagac
gaagttgaagcctggccgtatgattttgtagcatcctctgactttccttctcgtcaagaa
agaggaactgttaccggtcggctcttagtcaacgacagattcttgaccccggcacaatct
gcatacatcggtttagcaccgccgggagaagctggttcatggcagacaaatactaaggga
tatcaattttggacacagacgaacgaaaccggctatttcacaattgataacgttagaccg
ggaacttacaatctgtacggatgggttcccggttttatcggagactttcaataccaaaac
cgtgttaacgtagcggccggttcagagattagtctcgatagagttgtgtttaagcctcct
aggaatggtccaacgttgtgggagattggtgtaccggatcgaaccgctcgagaatacttt
gtaccggaaccatacaaggatacaatgaaccccttatacctaaaccacactgacaagttt
aggcagtatgggttatggcaacgatacacagagttatatccaaatcatgaccttgtctac
acaattggagttagtaactatagtcaaaattggttctacgctcatgtcacaaggaacata
gataagtcaacctatgtaccaacgacatggcagatcgtgtttcaacttccatatgtgaac
cggcgaggtagctacacattgcaactagctttagcctcggctgcacgagctaacttacaa
gtacggttcaacaacgagtactcgaggccattattctcaacgggtaacatcggaagagat
aatgctatagcaagacatggaatccacggagtctataggctttacagcgtcaatgttcct
ggaaggttactaagaaccgggaccaacacgatttatctaagtcaagctaaagcgaccgga
ccgtttgaaggtcttatgtatgactacattcgtcttgaagcgccttctagagcttag
DBGET
integrated database retrieval system