KEGG   Brassica oleracea (wild cabbage): 106328544
Entry
106328544         CDS       T04124                                 
Name
(RefSeq) rhamnogalacturonate lyase
  KO
K18195  rhamnogalacturonan endolyase [EC:4.2.2.23]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    106328544
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     106328544
SSDB
Motif
Pfam: Rhamnogal_lyase CBM-like fn3_3 CarboxypepD_reg RhgB_N CarbopepD_reg_2 Pam16 CBM_11
Other DBs
NCBI-GeneID: 106328544
NCBI-ProteinID: XP_013622465
LinkDB
Position
C1:577755..586456
AA seq 698 aa
MNEVRRMAKRKAGREEGGGSGTGESRPGERKSKRVVEKIASSSMICFLLLLLLPIAFSQP
TRNLDGISARAPTVQQIRNRHGAREVIVDNGIIRVSFSSPQGLITSIKYKGIDNVLNPHV
RTRGYWDITWQGENIRGLDGIEGTNFRIITQNEEQVEISFSRKWNGGSKHIPLNIDKRYI
IRTNTSGIYAYGVFERLSEWPEVEMGQVRLVFKLNTDRFRYMVVADDRQRQMPTDNDRDI
HRGHAKGLAYKEAVQLTNPADLKFKNQVDDKYQYSCEVKDNKVHGWISTKSHVGFWLISP
SGEYRSGGPSKQELTSHVGPTAITSFISGHYVGRDMVTTYKTGEAWKKVFGPVFIYLNSD
STGNNPRHSLWEDAKRQTEDEVEAWPYDFVASSDFPSRQERGTVTGRLLVNDRFLTPAQS
AYIGLAPPGEAGSWQTNTKGYQFWTQTNETGYFTIDNVRPGTYNLYGWVPGFIGDFQYQN
RVNVAAGSEISLDRVVFKPPRNGPTLWEIGVPDRTAREYFVPEPYKDTMNPLYLNHTDKF
RQYGLWQRYTELYPNHDLVYTIGVSNYSQNWFYAHVTRNIDKSTYVPTTWQIVFQLPYVN
RRGSYTLQLALASAARANLQVRFNNEYSRPLFSTGNIGRDNAIARHGIHGVYRLYSVNVP
GRLLRTGTNTIYLSQAKATGPFEGLMYDYIRLEAPSRA
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgaatgaggtgaggagaatggcaaagagaaaagcaggaagggaggaaggaggtggctcc
ggcaccggtgagagccggcccggagaacggaagtcgaaacgcgttgtggagaagatagct
tcttcgtcgatgatctgtttccttctgttgcttcttcttccaatcgctttttctcagcca
acaaggaacttagatggaataagtgcaagagctccaacagtgcagcagataagaaacaga
catggagctagagaggtgatagtggacaatgggattatcagagtcagtttctctagtcct
caaggacttataactagcatcaaatacaaaggaatcgataatgttcttaatccacatgtc
cgaactcgagggtactgggacattacatggcaaggagaaaacattcggggcttggatgga
attgaaggaaccaactttagaattataactcaaaacgaagaacaagtggagatttcattc
tcaagaaaatggaatggtggttctaaacatattccactaaatatagataaaaggtatatt
atacgaacaaatacgtcaggaatctacgcatacggagtcttcgagagactttccgaatgg
ccagaagtcgagatgggtcaagttcgattagtattcaaactcaacactgatagattccgt
tacatggtggtggcagatgaccggcaaagacaaatgccaaccgacaatgaccgtgacatc
caccgtggccatgccaagggtcttgcttacaaagaggctgtacaattgactaatcctgct
gacctaaagttcaaaaaccaggtggatgataaataccagtactcatgtgaggtcaaggac
aacaaggtgcatggttggatctcgaccaagtcccatgtcggtttctggctcatctcaccg
agcggcgaataccgctcgggtggacctagcaagcaggagctcacgtcgcacgtcggtccc
acggccatcaccagctttataagcgggcattatgttggtcgggacatggtgacaacgtac
aaaactggtgaagcgtggaaaaaggtcttcggacctgttttcatttacttaaactctgat
tctaccggcaacaatcctcgacattcattatgggaagatgctaaacgacagaccgaagac
gaagttgaagcctggccgtatgattttgtagcatcctctgactttccttctcgtcaagaa
agaggaactgttaccggtcggctcttagtcaacgacagattcttgaccccggcacaatct
gcatacatcggtttagcaccgccgggagaagctggttcatggcagacaaatactaaggga
tatcaattttggacacagacgaacgaaaccggctatttcacaattgataacgttagaccg
ggaacttacaatctgtacggatgggttcccggttttatcggagactttcaataccaaaac
cgtgttaacgtagcggccggttcagagattagtctcgatagagttgtgtttaagcctcct
aggaatggtccaacgttgtgggagattggtgtaccggatcgaaccgctcgagaatacttt
gtaccggaaccatacaaggatacaatgaaccccttatacctaaaccacactgacaagttt
aggcagtatgggttatggcaacgatacacagagttatatccaaatcatgaccttgtctac
acaattggagttagtaactatagtcaaaattggttctacgctcatgtcacaaggaacata
gataagtcaacctatgtaccaacgacatggcagatcgtgtttcaacttccatatgtgaac
cggcgaggtagctacacattgcaactagctttagcctcggctgcacgagctaacttacaa
gtacggttcaacaacgagtactcgaggccattattctcaacgggtaacatcggaagagat
aatgctatagcaagacatggaatccacggagtctataggctttacagcgtcaatgttcct
ggaaggttactaagaaccgggaccaacacgatttatctaagtcaagctaaagcgaccgga
ccgtttgaaggtcttatgtatgactacattcgtcttgaagcgccttctagagcttag

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