Brassica oleracea (wild cabbage): 106328548
Help
Entry
106328548 CDS
T04124
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00500
Starch and sucrose metabolism
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
106328548
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
boe01003
]
106328548
Enzymes [BR:
boe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
106328548
Glycosyltransferases [BR:
boe01003
]
Polysaccharide
Storage polysaccharide
106328548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_4_4
SIP1
Motif
Other DBs
NCBI-GeneID:
106328548
NCBI-ProteinID:
XP_013622468
LinkDB
All DBs
Position
C3:35077328..35081398
Genome browser
AA seq
662 aa
AA seq
DB search
MQSAANFPRIWNPSPIGSSSKVQLVNLKQHRKAHALHCLRSEGHEEKLENSSQDKLGVSS
VVKEDKHKDIWNLFREAQQNILYLNKQRLAAVEELEKLKNEKVELLERLNQLEAESQIVI
KKDKSSLLWELLLRVDSMVLNGLIGTEEASSMRQLVREHQANISEFPLDVLQQGDAQVLA
ELRQLPNRGKRNGLHVIHICTEMDPLVSVGPLASYITGLSCALQGKGYLVEVILPKYSTL
DLDEVEGLREIEADAYSYFNGQLHANRIWNGVVSGVGVTFIQPLYYSSMFSRDKVYGYPD
DVDRFAYFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLSCQG
FDSKCLVPPERLELCGLDPASLHRADRLQDNTNPQMVNILKGGIVYSNKVVIMSSAPSKS
IPGLEPTLAVHKEKLFFAPYGLDNSKWDPSIDVYLPQNYSAENLLGKSTCKVELQRQLGL
EENGSATIVGCIFSEISGVDLESLKSIIRSRKKNDVQFVIMIMNEDQMIINEMERTQDEI
EGGNLKVVTGSNEVVSHLIYAGSDIMVCLNFFQDPLLQVPLKALKYGTVPIELNPQTGYV
GTHEQEATTANFINSLFGRMSLDQALDLMKDGRLWKLKIVEAMEKDLCCDVHISAYTSIK
SL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcggcgaattttccacggatatggaatccatcgccaattgggtcatcctcg
aaagttcaattagtgaaccttaagcagcatcgaaaggctcacgcgcttcactgtttgaga
tcagaagggcatgaagaaaagcttgagaattcttctcaggacaaacttggagtgtcttct
gttgtaaaagaagataaacataaggatatatggaacctctttagagaagctcaacaaaat
atcctttacttaaacaagcaacgcctagctgccgttgaggagttagagaagctgaagaat
gagaaagttgaattgctagagaggttaaaccaattggaagcagaaagtcagattgtaatc
aagaaagataagtcatctctactatgggagttacttctccgcgttgattcaatggtgctc
aatggattgattggtaccgaagaagcttcatccatgagacaactggttagagagcatcaa
gcgaacatctctgagtttcctcttgatgtcctgcaacagggagatgcccaagttctagca
gaacttagacagttaccaaatagaggcaaaaggaatggtctccacgtgattcatatttgc
accgagatggatccactagtttctgttggacctttggcttcatatattacaggactctct
tgtgcactccaaggcaaaggctacttggttgaagttatactgccaaaatactctacactt
gatttggacgaagttgaagggcttagagaaatcgaagctgatgcatattcttatttcaat
ggtcagcttcatgctaaccgaatatggaatggagttgtctctggagtaggagtgacattt
attcaaccattgtattacagttcaatgtttagccgtgataaagtatatggctatccagac
gatgttgatagatttgcctacttttctcgtgcttcgttggattacattgcaaaatctggg
aagcagcctgatgtgttacacattcacaactggcaaactgcaatagttggaccgctgttt
tgggatgtttttgttaatcagggacttgaaggtacgagaatactcttgtcatgccaagga
tttgattcgaagtgtcttgtgcctcctgagaggttggagctatgtgggcttgatccagct
agtcttcatcgtgctgatcgcttacaagataacacgaatccacagatggttaatatattg
aagggtggtattgtctactcaaacaaagttgtaataatgtcatcagcaccttcgaaatca
atccctggtcttgaaccaactttagctgttcacaaggagaagttgttttttgctccctat
gggttggacaactcaaaatgggatccttcaatagatgtttatctccctcaaaactacagt
gctgaaaatttactgggaaaatcaacatgcaaagttgaattgcagcgtcaacttggttta
gaggaaaatggttcagccaccattgtagggtgcatcttctcagaaatatcaggtgttgat
ctcgagagcttgaagtcaattattcggagtagaaaaaagaatgatgtccagtttgttata
atgataatgaatgaagatcagatgataatcaacgaaatggagagaactcaagatgaaatt
gagggaggaaatctgaaggtggtgacaggaagcaatgaagttgtttctcatttgatttat
gcgggatctgacattatggtttgtctaaacttcttccaagacccacttctccaagtccct
ctcaaggctttgaagtacggaacagttccaatcgaactaaacccccaaaccgggtatgtt
ggaacacatgaacaagaggccaccactgctaactttatcaattctttattcggaagaatg
tccttagaccaagcattggatcttatgaaggatgggaggttgtggaagttaaagatagtg
gaagcaatggagaaagacttgtgttgtgacgttcacatctctgcatatacttccattaag
agcctgtga
DBGET
integrated database retrieval system
