Brassica oleracea (wild cabbage): 106328568
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Entry
106328568 CDS
T04124
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106328568
Spliceosome [BR:
boe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106328568
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GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
DUF8400
Motif
Other DBs
NCBI-GeneID:
106328568
NCBI-ProteinID:
XP_013622495
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Position
C3:8077660..8080749
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AA seq
418 aa
AA seq
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MSSVSSQQQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANKNQAFI
EFEDLNQAIQMISFYASSSEPAQVRGKTVYLQYSNRQEIVNNKTAADVVGNVLLVTVEGE
DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFSDAETATSARTSLDGRSIPSYL
LPEEVSQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVIVGVDGRKME
PESNVLLASIENMQYAVTLDVLHTVFAAFGAVQKIAMFDKNGGVQALIQYPDVQTAVVAK
GALEGHCIYEGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPDAAVAMAPQPSHNPYPGNS
QQYHAAGASHYQQQPQGGWGQSGGQGHDPYMAAPSMHQGPGGHMPPHHYGGGPSGPMH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtttcaagccagcaacagttccggtacacgcagactccttcgaaggttctt
catctgaggaacttgccttgggaatgcactgaagaagagctgatcgagctcgggaagccc
tttggcaccgttgtgaatacgaagtgcaacgttggagctaataaaaatcaagctttcatt
gagtttgaagatttgaaccaagcgatacagatgatttcgttctacgcgtcttcgtcggag
cctgctcaggttcgagggaaaactgtctacctacagtactccaacaggcaggagattgtg
aacaacaaaacggcggcggatgttgtggggaatgtgcttcttgtgacagtcgaaggggag
gatgctcgcatggtcagcattgatgtcttgcatctggtattctcagcctttgggtttgtc
cacaagattactactttcgagaagacagctggatatcaggcacttgttcaattttctgac
gcagaaactgcaacctctgcaagaacttccctcgatggcagaagcattcctagttatcta
ctcccagaggaagtcagccaatgctctcttaaaatcacgtactcagctcatacagatttg
actgtcaaattccagagtcatcggagcagggactatactaacccttatcttcctgtggct
ccatcagccattgatagtactggtcaggtgattgttggtgtagacggcaggaagatggag
cctgaaagtaatgttcttcttgcatccatcgagaacatgcagtatgctgtaaccttggat
gttttacacacggtttttgcggcatttggagctgttcaaaagattgcaatgtttgacaag
aatggtggggtacaggcattgattcaatacccagatgtgcaaacggctgtggtggcgaag
ggagcattggaaggacactgtatttatgagggtgggttttgtaagctacacatcacttac
tcgcgccacactgacctcagcataaaggtgaacaatgatagaagcagagactacacaatg
cctgacgcggctgttgcgatggctccacagcccagccataatccatacccgggtaattca
cagcaataccatgcagcaggtgcgagccattaccagcagcagccacaagggggatggggt
caatcaggagggcaaggccacgatccctacatggcagcaccgtcgatgcatcaaggtccg
ggtggtcatatgccgccacaccattatggtggtggtccttctggtccaatgcattag
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