Brassica oleracea (wild cabbage): 106328880
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Entry
106328880 CDS
T04124
Name
(RefSeq) probable beta-1,3-galactosyltransferase 16 isoform X1
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
boe01003
]
106328880
Glycosyltransferases [BR:
boe01003
]
O-Glycan biosynthesis
O-linked Gal type
106328880
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
106328880
NCBI-ProteinID:
XP_013622903
UniProt:
A0A0D3AFB4
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Position
C1:41980846..41993964
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AA seq
602 aa
AA seq
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MMLQSMSMVKLKFGFTSVRMRNLSVGISVMVLTLILIILQPGHKLTKKNLTVDEFDIEEE
STVLITMEDLDYLFSNSSFYKEEDESNGFLVWSLMRPFLERHDALPETGQGVEEAALAGK
GLVSLINKEKGHSASGMVSTKGRRTCPDFVNAVDVDLSGSTPVLELPCGLTEDSSITFVG
VPDEHSRSFQIQLLGSGVLRYDVNFSKQSIVQNTWTERSGWGEEVRCPSHGSFKNYIVVD
ELPLCNEQTSRITLDDFPFLKGSPLTATLWFGLEGFHMAVNGRHETSFPYREVRNDATKS
LQKLEPWLVSAVKVSGGLKLLSASATRLPVPDENHSSLAIEEKLKAPPLSGTRITLLVGV
FSTGNNFKRRMALRRSWMQYEAVRSGEVAVRFLIGLHTNEQVNLEMWREAKAYGDIQFMP
FVDYYGLLSLKTVALCILGTKVIPSKYIMKTDDDAFVRIDELLMSLKEKPSNALLYGLIS
FDSSPDREQGSKWYIRKEEWPLDSYPPWAHGPGYIITQDIAKFVVKGHLERDLRLFKLED
VAIGIWIQQYNQTVKRVKYMNDKRFHNSGCKPNYILVHYQTPRLLLCLWEKLQKESQSVC
CE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcagtctatgtcaatggtgaaactcaagtttgggttcacttcagtcagaatg
aggaacttgtcggtgggaatctctgtcatggttcttacattgatcctcatcatccttcaa
cctggtcacaaacttacaaagaagaatctgactgtggatgagtttgatatagaagaagag
agtactgttttgatcactatggaagatcttgattacctcttttcaaacagtagcttttac
aaagaagaagatgagtctaatgggtttcttgtatggtctctcatgcgtccgtttctcgaa
aggcatgatgcattgccagaaactggtcagggggtcgaagaggctgcattggcagggaaa
ggtttagtctctctgatcaataaagagaaaggacattctgcttctggtatggtctctacg
aaaggcagaagaacttgtccggactttgtaaatgcagttgatgtggatttgtccggctca
acgcctgttcttgagctaccgtgtggtttaactgaagattcttctataacatttgttggt
gttcctgatgaacattcgagaagcttccagattcagctccttggctcaggcgtcttgcgt
tatgatgtgaacttttctaagcaatccatagtgcaaaacacatggacagaaaggtccggg
tggggagaggaagtgagatgcccaagtcatggatcatttaagaattatattgtagttgat
gagcttcctctctgcaacgaacagacaagcagaatcactctggatgattttccatttctc
aaagggagtcccctcactgccacattgtggtttggattagaaggctttcatatggctgtt
aacgggcggcacgagacttcatttccttacagagaggtaaggaatgacgctacaaagtct
ttgcagaagcttgagccttggttagttagtgctgtgaaagtctcaggtggtctaaaactg
ttatctgcttcagccacaaggctgcctgttcctgatgagaatcattcttctttagctata
gaagagaagctgaaagctccccctctttccggaacaaggataacattgctggtgggtgtt
ttctccactggaaataactttaagcgacgtatggcattgagaagatcttggatgcaatat
gaggcagtaagatctggagaagttgctgttcggtttctcattggccttcacactaatgag
caagtcaatctagagatgtggagagaagctaaagcatatggtgacattcagtttatgcct
tttgttgattactatggtttacttagcctgaaaactgttgcgctttgcattctcgggacc
aaagtcatcccatcaaaatacataatgaagacagacgatgatgcgtttgttcggatcgat
gaactgctaatgagtctaaaagaaaaaccgtctaatgcacttttatatggtctgatatca
tttgattcatcgccagaccgtgagcaaggcagcaaatggtacattcgtaaagaggagtgg
cctctagattcatatcctccatgggcacatggccctggctacatcatcactcaggatata
gctaaatttgtggtgaagggtcaccttgaaagagatcttagacttttcaagctggaagat
gtggcgatagggatatggattcaacaatacaaccagacagtaaaaagagtgaagtacatg
aatgacaaaaggtttcataatagcggttgtaaaccgaattacattcttgttcattaccaa
actcctcggctacttttgtgtctgtgggagaagcttcaaaaggagagccaatctgtctgc
tgcgaatag
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