Brassica oleracea (wild cabbage): 106329100
Help
Entry
106329100 CDS
T04124
Name
(RefSeq) putative chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106329100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106329100
03036 Chromosome and associated proteins [BR:
boe03036
]
106329100
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
106329100
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
106329100
RSF complex
106329100
WICH complex
106329100
B-WICH complex
106329100
NORC complex
106329100
BRF complex
106329100
NuRF complex (fruit fly)
106329100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
106329100
NCBI-ProteinID:
XP_013623184
UniProt:
A0A0D3AFB6
LinkDB
All DBs
Position
C1:complement(42015491..42020989)
Genome browser
AA seq
1051 aa
AA seq
DB search
MAKFSNRDDALSSEEEEEEEENVNTNIGEEDEEELEAVTRSSDSDEEAAPVSDEEVAPIE
DDYEDEDDDDKVEISKREKARLRDMQKLKKQKIQEMLDSQNASIDADMNNKGKGRLKYLL
QQTELFSHFAKGDPSSSQKKAKGRGRHASKVTEEEEDEEYLKEEEDGLAASGNTRLLTQP
SCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHM
VVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMAIKE
KTALRRFSWRYIIIDEAHRIKNENSLLSKTMRIFSTNYRLLITGTPLQNNLHELWALLNF
LLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG
DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYRYCRIDGNTGG
DERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHR
IGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYG
AEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIQFKMDDSADFYDFDDDD
KDESKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQLHDF
QFFNTQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEGGDPLTAEEVEEKESLLEEGFS
TWSRRDFNSFLRACEKYGRNDIKSIASEMEGKTEEEVERYAQVFKERYKELNDYDRILKN
IERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMVNKLG
YGNWDELKAAFRTSPLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQARKEK
KLAKSATPSKRPLGRQQSESPSSLKKRKHLR
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttctcgaatcgcgacgatgctctctcttccgaggaggaggaggaggaggaa
gagaatgttaacaccaacataggagaagaagatgaggaggagctcgaggccgttactcga
tcttccgattccgatgaagaagctgcgccagtctctgacgaagaggttgctcctatcgag
gatgattacgaggatgaagatgacgatgataaggttgagatcagtaaacgtgagaaagct
aggcttagggatatgcagaagctgaagaaacagaagattcaggagatgcttgattctcag
aatgcttctatagatgctgatatgaacaataaggggaaagggaggctgaagtatcttctg
cagcagactgagttgttttcgcattttgctaaaggtgatccatcttcttctcagaagaag
gcgaaaggaaggggtcgacatgcttccaaagtaactgaagaggaggaagatgaagagtat
ttgaaggaagaagaggatggcttggctgcatctggtaacacgaggttgctcacacagcct
tcttgtattcaagggaagttaagagattaccaattagctggtttgaactggctcatacgg
ctgtatgagaatggcataaatggaattcttgctgatgaaatgggtctggggaagacactt
caaacaatttctttgctggcctacctacatgaatacagaggaatcaatggtcctcatatg
gtagttgctccaaagtcaacccttggtaattggatgaacgaaattcgccggttttgtcct
gtcttgcgagctgtgaaattcctcggtaatcctgaggaaaggaggcatattcgtgatgac
ctgctagttgctgggaaatttgatatttgcgtcacaagctttgagatggccatcaaagag
aagacagcattgcgtcgctttagctggcgttatattatcatcgatgaagcgcatcgaatc
aagaacgaaaattcactcctttcgaagacaatgagaatttttagcaccaattatcggctt
cttatcacgggaaccccccttcagaacaatctccatgaattgtgggcccttctcaatttt
ctcctgcctgagatctttagttcagcagagacttttgatgaatggtttcaaatatctggc
gagaatgaccagcaggaagttgttcaacaacttcacaaggtccttcgaccatttcttctg
cgtagactgaagtcagatgtcgagaaaggtttgccaccaaagaaggagacgatacttaaa
gttggaatgtctcagatgcaaaaacaatactataaggctttactgcagaaagatcttgaa
gcagttaatgctggtggagaacgcaaacgtctgctaaacattgcaatgcaactgcgtaaa
tgctgtaatcacccttatctcttccagggtgcagagcctggcccaccatataccacagga
gatcacctcattacaaatgctggtaagatggttctcttggataaattgcttcctaagttg
aaggaacgtgattcgagggttctaatattttctcagatgacaaggcttttggatattctt
gaggattatttaatgtatcgtggttatcgatattgccgaattgatggaaatactggtggt
gatgaacgagacgcctccatagaagcctacaacaagccaggaagcgagaaatttgttttc
ttgttatctaccagagcaggagggcttggtatcaatcttgccactgcagatgttgtgatt
ctttatgatagtgactggaacccgcaagtcgacttgcaagcgcaggatcgtgcccatagg
attggtcaaaagaaagaagttcaagtgtttcgattctgcactgagtctgctattgaagag
aaagtaattgagagagcgtacaagaagttggcgcttgatgctctggttattcaacaagga
cgactggcagagcagaaaactgtcaataaggatgagttgcttcaaatggtaagatatggt
gctgagatggtgttcagctccaaagatagcacaatcacagacgaggatatcgatagaatc
attgcgaaaggagaggaggctacagctgaacttgatgccaagatgaagaaatttacagaa
gatgctatacagtttaaaatggatgacagtgctgacttctatgattttgatgatgacgat
aaggatgagagcaagcttgattttaaaaagattgtgagcgacaactggaatgatccacca
aagcgggagagaaagcgcaactactctgaatctgaatactttaagcaaacattgcgacaa
ggtgctccagctaaacctaaagagcctagaattccgcgcatgccccagttgcacgatttc
cagttctttaacactcagagattgaccgagttgtatgaaaaggaagtacgctatctcatg
caaacacatcaaaaaaatcagctgaaagacacaattgatgtagaagaaccagaaggtgga
gatcccttgactgctgaagaagtagaagaaaaggagagtttattggaggagggtttctca
acatggagcagaagagacttcaatagtttcctcagggcttgtgagaagtatggccgcaac
gacatcaaaagcattgcctctgagatggaaggtaaaacagaggaagaagttgaaagatat
gcacaagtattcaaagagcgatacaaggagctgaacgactacgacaggatccttaagaac
attgagaggggagaggcaagaatctccaggaaagatgaaatcatgaaagccatagggaag
aaactggaccgctacagaaacccttggctggaactgaagattcaatacggtcagaacaaa
gggaagctgtacaatgaagagtgcgaccgtttcatgatctgcatggtcaacaaacttggg
tatgggaactgggatgagctaaaggcagcattcaggacttcgcctctgttcaggttcgac
tggtttgtgaaatcccgcacgagtcaggaactcgcaagaagatgcgacactctgattcgg
ctgattgaaaaggagaatcaagagtttgatgagagagagaggcaagcccgtaaagagaag
aagctcgcaaagagtgcaacaccatcaaagcgacctttaggaaggcaacaaagtgagagt
ccttcatcgctgaagaagcggaagcatctgagatga
DBGET
integrated database retrieval system
