Brassica oleracea (wild cabbage): 106329134
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Entry
106329134 CDS
T04124
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106329134
09122 Translation
03015 mRNA surveillance pathway
106329134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106329134
Spliceosome [BR:
boe03041
]
Complex A
Other components
Complex A specific factors
106329134
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
106329134
NCBI-ProteinID:
XP_013623186
LinkDB
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Position
C3:6287154..6290360
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AA seq
400 aa
AA seq
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MSGMYNQDGGGGAPISSYGGDAGYGGRSASGGGGYGGRGGGRGNNRGGGGGGGYQGGDRG
GRGGAGGGRGGGGRDGDWPCPNPSCGNVNFARRVECNKCGAPAPSGTGDRGGGRGASDRG
GGGRDSGSRSCESSRYDGGSRSRGDGVGGGSYGSNSQHRDNGSYSQRPPPLAAIPSYDGS
GSYSPPPMGYGMEAVPPPSSYAGGPPSYGGPSGGYDGGRGGRGGGYDGGSASRRQEPSYG
DAPAEKVKHCDENCDETCDNARIYISNLPPDVTVDELKDLFGGIGQVGRIKQKRGYKDQW
PYNIKIYTDEKGKNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIGVTMAEKSAPKAPTF
DQRGGGGRGGGGYGGGDRRRDNYGSGPDRNHHGGNRSRPY
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtatgtacaatcaagacggcggcggtggtgcgcctatttcgtcctacggtggt
gatgctggatatggaggacgcagtgcctctggcggaggtgggtacggcggacgcggtggc
ggtagaggaaacaaccgtggaggcggtggcggtggtggatatcaaggaggtgatcgcggt
ggaagaggaggcgccggcggcggaagaggtggtggtggcagagatggtgattggccttgc
cctaacccaagttgtgggaacgtaaactttgcaaggagagttgaatgtaacaagtgtggt
gcgcctgctccttctggcactggtgaccgaggaggtggccgaggggccagtgatcgtggt
ggtggtggtcgtgatagtggtagtaggagctgtgagagtagtagatatgatggtggcagt
aggagtagaggtgatggtgttggtggtggctcgtacggtagtaatagtcaacatagggat
aatggttcttatagtcagcgtcctccacctctggctgctattccatcgtatgatggttct
ggcagttactctcctccacccatggggtatggaatggaagcagttcccccgccttcaagc
tatgctggcggtcccccttcttatggtggtccttcagggggttatgatggtggtcggggt
ggtagaggtggtggatatgatggtggtagtgcttctcgacgccaggagcctagttatgga
gatgcacctgctgaaaaagtcaagcattgcgacgagaattgtgatgaaacttgtgataat
gcaagaatatacatctctaatttacctccggatgtgaccgttgatgaactcaaggatctc
ttcggtggcattggtcaagttggaagaatcaagcagaaacggggttacaaagaccagtgg
ccttataacatcaagatctacactgatgagaagggaaagaataaaggtgatgcatgtctg
gcttatgaagatcccagcgccgcacactcagcaggcggctttttcaacaattatgaaatg
agggggaacaagattggtgtaacgatggcagagaagtctgctcccaaagctcctactttt
gaccagagaggcggtggtggtagaggaggaggcggctatggtggtggagacagaagaaga
gataactatggttcaggaccagacagaaaccaccatgggggaaaccggtctcgtccatat
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