Brassica oleracea (wild cabbage): 106329188
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Entry
106329188 CDS
T04124
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106329188
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106329188
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
106329188
NCBI-ProteinID:
XP_013623258
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Position
C1:complement(3568210..3570520)
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AA seq
425 aa
AA seq
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MKCLKTLFSMIIVVSCHLEYGDGRRILRIKDFITDTNHKNVDYSQVFQKAWKGLCEGEGE
GEGTGGSSLVINENEKYTIQPQLFEGPCVSSYIHIQIDGKIEAPKRPKQWGNKRTESWLM
FKNVESLFINGSGVLDPHGETWWRSVRHSKRPRTLSFKQCTDIIYNGLTQYNSPKNHISV
YGCTNATLSNLTLLAPEKSPNTDGIGISLSHNIRILDSSIQTGDDCIAITGGRGGSSDIN
ITRVACGPGHGISIGSLGKGDIDDTVEKVIVRSCSFWGTQNGARIKTGGKRLAKNMLFEN
ITVTNTKYPIIIDQHYSNGGTGHVKGNAVKVSDVTFRYIEGTSASKIAIKLDCDENQECH
DIVMEHIKLTSAKPGKKLSAYCKFAGVKASFVNIHINCGLYISSTFAVVSSSSKNYLATY
TKDIF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgaaaacattattctcaatgattatagttgtatcgtgtcatctggaatac
ggagatggccggaggattctaaggatcaaagatttcataactgatactaaccataaaaac
gttgattattcacaagtatttcaaaaagcatggaaagggttatgcgaaggtgaaggtgaa
ggtgaagggactggcgggtcatcgctagtgataaatgagaatgaaaaatacactatacaa
ccacaactgtttgaaggtccatgcgtatcttcttacattcatatccagatcgatgggaaa
atagaagcgccgaagagaccaaaacagtggggaaacaaacgaactgagagttggttaatg
ttcaagaacgtggaaagtctcttcatcaacggctcaggtgtccttgacccccatggagaa
acttggtggcgatctgttcgtcactctaaacgacccagaacacttagctttaagcaatgc
accgacataatatataatgggctaactcaatacaatagtccaaagaatcacatttcagtc
tatggttgcaccaatgcaactttatcaaatcttactttgctagcacccgagaagagtcca
aacactgatggcattggtatttctctttcacacaatattcgtatcttagactcgtctatc
caaactggtgatgattgtattgcaattactggtgggcgtggtggttcttccgacatcaac
attactcgtgtggcatgtggtccaggtcatggtatcagcattggaagtttgggcaaaggt
gatatagatgacactgttgagaaagtgatcgtaagaagctgcagcttttggggaactcag
aatggggcaagaatcaagacgggaggaaaaaggttagccaagaatatgttatttgaaaat
attacggtaacaaatactaaataccccataatcatcgatcaacattactctaatggtggc
actggtcatgtcaaggggaatgcggtgaaagtaagcgacgtaacattcagatatattgaa
gggacctcagcaagtaaaattgcaataaagctagactgtgatgaaaatcaagagtgtcat
gacatcgtgatggaacatatcaaactcacatctgcaaagccggggaagaaactctctgca
tattgtaaatttgcaggtgtgaaagcttcattcgttaacatccatataaactgtggttta
tatatatcctcaacttttgccgttgtttcctcctcttccaaaaattatttagcaacatat
acaaaggatattttttaa
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